Factsheet for HORVU5Hr1G006980.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
iPSORT:	secretory
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G111650.1	Barley	cytosol	17.23	35.11
HORVU0Hr1G015190.1	Barley	cytosol	26.22	34.48
HORVU5Hr1G006960.7	Barley	cytosol	99.25	31.36
HORVU5Hr1G007040.1	Barley	cytosol	97.0	30.61
HORVU1Hr1G089930.4	Barley	cytosol	31.46	29.79
TraesCS5B01G023600.1	Wheat	cytosol	73.03	22.86
TraesCS5D01G032300.1	Wheat	cytosol	72.28	22.76
HORVU6Hr1G094200.2	Barley	cytosol	44.57	14.15
HORVU6Hr1G075320.1	Barley	mitochondrion	50.56	14.12
HORVU7Hr1G006150.5	Barley	plastid	28.09	13.61
HORVU6Hr1G094170.1	Barley	mitochondrion	47.94	13.33
HORVU7Hr1G121200.2	Barley	plastid	26.59	13.25
HORVU5Hr1G123480.1	Barley	cytosol	32.58	12.78
HORVU6Hr1G084930.1	Barley	cytosol	42.32	12.03
KXG21363	Sorghum	cytosol	50.94	11.56
HORVU6Hr1G090550.1	Barley	peroxisome	29.96	10.85
HORVU7Hr1G096640.2	Barley	cytosol	34.46	10.3
HORVU7Hr1G111700.2	Barley	cytosol, mitochondrion, plastid	35.96	10.04
HORVU7Hr1G111630.6	Barley	cytosol	34.83	9.91
HORVU5Hr1G022730.3	Barley	cytosol	34.08	9.57
HORVU1Hr1G005470.2	Barley	cytosol	32.96	9.46
HORVU7Hr1G110630.1	Barley	cytosol	29.96	9.17
HORVU6Hr1G090470.10	Barley	extracellular, plasma membrane	31.09	8.74
HORVU6Hr1G014320.2	Barley	cytosol	36.7	8.6
HORVU5Hr1G093970.1	Barley	cytosol	30.34	8.58
HORVU3Hr1G112930.1	Barley	cytosol	29.59	8.09
HORVU7Hr1G115990.1	Barley	mitochondrion	27.72	6.9
HORVU0Hr1G015160.2	Barley	cytosol, nucleus	11.98	3.53
HORVU0Hr1G017790.1	Barley	endoplasmic reticulum, golgi	3.37	1.29
HORVU1Hr1G089890.3	Barley	cytosol	1.12	0.49
HORVU1Hr1G002680.2	Barley	plasma membrane	0.75	0.31
HORVU7Hr1G111710.2	Barley	cytosol	0.0	0.0
HORVU7Hr1G121190.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G092510.2	Barley	cytosol, plasma membrane	0.0	0.0
HORVU7Hr1G111620.1	Barley	cytosol, nucleus	0.0	0.0
HORVU7Hr1G111610.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G060040.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G092680.7	Barley	cytosol	0.0	0.0
HORVU6Hr1G092500.1	Barley	mitochondrion	0.0	0.0
HORVU5Hr1G125350.1	Barley	cytosol	0.0	0.0
HORVU5Hr1G058640.1	Barley	peroxisome	0.0	0.0
HORVU1Hr1G004870.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G107310.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G089990.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G089960.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G005520.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G006980.1	EnsemblPlantsGene:HORVU5Hr1G006980	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9
PFAM:PF00931	SEG:seg	SUPFAM:SSF52540	UniParc:UPI000B47EE0B	UniProt:A0A287Q9W2	MapMan:35.2

Description

No Description!

Coordinates

chrchr5H:+:12671698..12672590

Molecular Weight (calculated)

29315.9 Da

IEP (calculated)

4.808

GRAVY (calculated)

-0.366

Length

267 amino acids

Sequence
(BLAST)

001: MEEEGLVSAA TGALQPALAK LAALLGDEYK EVRGEVELLT RELAAMDAFL LTKSEEEEDH SSQDKACMHE IRELSYDIDD DLGGFIMASV PDKSAELAGL
101: LDKMQAMLGR TKARHQMIAT AVDDLKEQVV KVAERHSHHK RPKVDDGRAL ATVNNASSEL VGIDGPKEEL IQLLTGSDSE STQQQPNPSL VAIVGSGGMG
201: KTTLAKQVYK DLKQIQFNCH AAFCSVPRSS DKVQVIRAIY KKLNRSYYPS PDEDLRQLVT MISDFLE

Best Arabidopsis Sequence Match ( AT1G58807.2 )
(BLAST)

001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNM LSSFLKDANA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRQKFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
401: FNDDNNNTCN NVLSLSFEEL PSYLKHCFLY LAHFPEDYEI KVENLSYYWA AEGIFQPRHY DGETIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
501: MMREVCLLKA KEENFLQITS SRPSTANLQS TVTSRRFVYQ YPTTLHVEKD INNPKLRALV VVTLGSWNLA GSSFTRLELL RVLDLIEVKI KGGKLASCIG
601: KLIHLRYLSL EYAEVTHIPY SLGNLKLLIY LNLASFGRST FVPNVLMGMQ ELRYLALPSD MGRKTKLELS NLVKLETLEN FSTENSSLED LCGMVRLSTL
701: NIKLIEETSL ETLAASIGGL KYLEKLEIYD HGSEMRTKEA GIVFDFVHLK RLWLKLYMPR LSTEQHFPSH LTTLYLESCR LEEDPMPILE KLLQLKELEL
801: GFESFSGKKM VCSSGGFPQL QRLSLLKLEE WEDWKVEESS MPLLRTLDIQ IHCRL

Arabidopsis Description

RDL5Probable disease resistance protein RF45 [Source:UniProtKB/Swiss-Prot;Acc:F4IBE4]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.