Factsheet for TraesCS5D01G032300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
iPSORT:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G023600.1	Wheat	cytosol	90.8	90.27
HORVU1Hr1G004870.1	Barley	cytosol	10.97	83.04
HORVU5Hr1G007040.1	Barley	cytosol	80.31	80.5
HORVU5Hr1G006960.7	Barley	cytosol	80.07	80.36
HORVU5Hr1G006980.1	Barley	cytosol	22.76	72.28
TraesCS2D01G545300.1	Wheat	cytosol	58.14	57.8
TraesCS6D01G399700.1	Wheat	cytosol	3.77	50.79
TraesCS6D01G399200.1	Wheat	cytosol	27.83	45.04
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	46.7	42.4
TraesCS6D01G386700.1	Wheat	cytosol	46.11	41.91
TraesCS5D01G492200.1	Wheat	cytosol	45.99	41.8
TraesCS6D01G399400.1	Wheat	cytosol	44.46	41.43
TraesCS7D01G086700.2	Wheat	cytosol	45.28	41.25
TraesCS7D01G409800.1	Wheat	cytosol	41.86	39.75
TraesCS5D01G557600.2	Wheat	cytosol	42.92	38.89
TraesCS7D01G412600.1	Wheat	extracellular	20.4	38.53
TraesCS5D01G086400.1	Wheat	cytosol	24.88	37.61
TraesCS6D01G398700.1	Wheat	plasma membrane	45.28	36.43
TraesCS7D01G540600.1	Wheat	cytosol	20.64	35.0
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	21.58	34.59
TraesCS6D01G399500.1	Wheat	plastid	36.32	33.88
TraesCS7D01G486400.1	Wheat	cytosol	36.67	33.69
TraesCS6D01G372900.1	Wheat	cytosol	14.74	33.69
TraesCS5D01G098700.1	Wheat	cytosol	37.03	33.05
TraesCS1D01G416300.1	Wheat	cytosol	13.09	32.94
TraesCS5D01G557700.1	Wheat	cytosol	36.56	32.67
TraesCS5D01G390500.1	Wheat	cytosol	35.97	32.38
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	36.56	32.36
TraesCS3D01G076100.1	Wheat	cytosol	36.32	32.35
TraesCS5D01G557500.1	Wheat	cytosol	35.97	32.28
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	35.61	32.23
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	36.08	32.21
TraesCS5D01G548400.1	Wheat	cytosol	35.73	32.1
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	36.32	31.98
TraesCS5D01G098800.2	Wheat	plastid	34.08	31.69
TraesCS5D01G547200.1	Wheat	plastid	34.55	31.14
TraesCS5D01G554600.1	Wheat	cytosol	34.43	30.96
KXG21363	Sorghum	cytosol	42.81	30.87
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	35.73	30.73
TraesCS7D01G201200.1	Wheat	cytosol	10.14	30.71
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	34.43	30.61
TraesCS5D01G548300.1	Wheat	cytosol	34.08	30.45
TraesCS7D01G479800.2	Wheat	cytosol	28.77	30.39
TraesCS6D01G076600.1	Wheat	cytosol	39.27	30.25
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	33.25	30.16
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	33.84	30.15
TraesCS1D01G090600.1	Wheat	cytosol	34.43	29.95
TraesCS5D01G547800.1	Wheat	cytosol	27.95	29.74
TraesCS7D01G116500.1	Wheat	golgi	32.9	28.15
TraesCS1D01G019600.1	Wheat	cytosol	17.1	28.1
TraesCS7D01G540500.1	Wheat	cytosol	32.67	28.04
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	32.55	27.77
TraesCS1D01G045300.1	Wheat	cytosol	14.39	26.87
TraesCS2D01G585700.1	Wheat	cytosol	27.48	26.81
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	31.96	26.81
TraesCS7D01G479900.1	Wheat	cytosol	14.74	26.26
TraesCS7D01G540000.1	Wheat	mitochondrion	5.54	23.86
TraesCS1D01G416200.1	Wheat	cytosol	11.67	21.81
TraesCS6D01G399100.1	Wheat	plasma membrane	45.28	19.35

Protein Annotations

EnsemblPlants:TraesCS5D01G032300.1	EnsemblPlantsGene:TraesCS5D01G032300	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:AAA+_ATPase	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SMART:SM00382	SUPFAM:SSF52047	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:-:29609673..29619635

Molecular Weight (calculated)

95310.8 Da

IEP (calculated)

5.605

GRAVY (calculated)

-0.190

Length

848 amino acids

Sequence
(BLAST)

001: MEEGLVSAAT GALQPALAKL AAVLSDEYKG VRGEVEHLTR ELADMDAFLL AKSSSSSDLI PSELDKACMH EIRELSYDID DDLDDFIMAS VCDKSAKLAG
101: LLDEMKAMLG RTKARHQITK AVDDLKEQVV HVAERHTHKR SKVDHRAPTV VDDASKLVGL DGPKQELIQL LAGSVESTQQ QQPHPNLVAV VGSGGTGKTT
201: LANQVYQKLK GQLDCHAFCS VRRNADKVQV LHSIYNQLYS SYNNLGRRSS PRPGVRDLPG LITMISNYLQ HRRCIIVLDD IWDVEILKVI ECAFPTASSG
301: SKIIITTRIH AVAQSCCSTF SGHVYNIRPL SMVHSRQLFY TRLFNSEEKC PSYLKEISGQ ILDKCAGLPL AIIAMSSVLA DKASEKEIWD QVKDLIGRAL
401: RNSSVEDMVN IISLSYLDLP PHLKTCLLYL SIFPEGHIIE KENLIRRWIG EGFIQKKSGY TVYESGEMCF NDLINRSLIQ AAKMDETFGD EVKSCRVHDT
501: VHNFIVSKAV EENFVTIVGV LGVINPDPKA KIRRVSLQND GEIPPSLDVS SARSLHVFGR NGKIPSLSEF RLLRVLDFED CSQLEDDHLE GIANLVHLKY
601: LRFKHAKAVT KIPEQVAMLH HLEIDVKGYS KLMEIPMTIQ ERLVCYVTLH VDGYETVPDE IAAMQGLRVL EGLNIYTQST EFLKRLGQLK KLRKLGIIWN
701: MYDMSNCDVN EDKEEEEVEE DEEEFLSSIC ELGKAGLESL HISVKEAADA YFKLSWFPDP QCGLRELIIM GDSLSEVPTW VASLVNLEKL CITMRVINER
801: DMEILRGLPS LRHLRIYADE DDVSESRAAM EKAMEEHPNR PTLVWYEY

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.