Factsheet for Os12t0565100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G093500.1	Wheat	cytosol, golgi, peroxisome	73.86	54.88
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	73.29	53.55
TraesCS5B01G031600.1	Wheat	endoplasmic reticulum, extracellular	71.43	53.36
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	71.14	53.15
EES16173	Sorghum	cytosol	68.29	52.93
Os11t0629550-00	Rice	cytosol	48.86	52.86
TraesCS3B01G541100.1	Wheat	endoplasmic reticulum, extracellular	71.57	51.81
Os06t0163900-01	Rice	cytosol	11.86	44.62
Os10t0132700-01	Rice	cytosol	16.43	40.93
Os02t0272900-01	Rice	cytosol	42.0	40.05
Os12t0564800-01	Rice	plastid	55.29	39.77
HORVU7Hr1G060040.1	Barley	cytosol	16.0	39.02
HORVU3Hr1G107310.1	Barley	cytosol	27.43	37.65
Os11t0258500-00	Rice	cytosol	50.0	36.08
HORVU5Hr1G058640.1	Barley	peroxisome	13.57	35.85
Os11t0238000-00	Rice	cytosol	36.57	35.65
Os11t0249000-01	Rice	cytosol	44.71	34.1
Os08t0412100-01	Rice	plasma membrane	44.71	32.57
Os12t0273300-01	Rice	mitochondrion	42.29	32.21
Os01t0335700-01	Rice	cytosol, plasma membrane	36.86	31.27
Os11t0265900-02	Rice	cytosol	41.0	31.06
TraesCS5A01G087600.1	Wheat	cytosol	20.71	30.72
Os11t0237900-00	Rice	golgi	40.0	30.14
Os08t0387700-01	Rice	cytosol	39.71	30.05
Os11t0237600-01	Rice	cytosol, nucleus, peroxisome	42.57	29.83
Os08t0372700-00	Rice	nucleus	38.57	29.7
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	38.29	29.16
Os08t0388300-01	Rice	cytosol	40.29	28.95
Os11t0629600-01	Rice	cytosol	22.0	26.64
Os11t0238700-00	Rice	cytosol	22.0	25.75
Os08t0174800-01	Rice	cytosol	28.14	24.69
Os10t0133000-00	Rice	cytosol	2.0	8.19
Os08t0411850-00	Rice	cytosol	2.14	7.98
Os12t0565200-00	Rice	cytosol	3.14	7.91
Os11t0629582-00	Rice	cytosol	1.14	4.88
Os08t0176200-01	Rice	plasma membrane	1.57	2.76
Os02t0273000-01	Rice	cytosol, plasma membrane	0.71	1.02

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:ABA98975.1	EMBL:AK065775
ProteinID:BAT17683.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	EnsemblPlantsGene:Os12g0565100	EnsemblPlants:Os12t0565100-01	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43889	PANTHER:PTHR43889:SF5	UniProt:Q2QNH8	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI0000680DEA	:	:	:	:	:

Description

NB-ARC domain containing protein. (Os12t0565100-01);NB-ARC domain containing protein. (Os12t0565100-02)

Coordinates

chr12:+:23182563..23188498

Molecular Weight (calculated)

80234.3 Da

IEP (calculated)

7.126

GRAVY (calculated)

-0.265

Length

700 amino acids

Sequence
(BLAST)

001: MASALTGVMT SVINKLTALL GKEYMKLKGV QGEVEFMIDE LSSMNALLHR LAEEDQHLDV QTKEWRNQVR EMYYDIEDCI DDFMHHLGHT DIAESAGLVH
101: RMAQHLKTLR VRHQIANQIE KLKARVEDAS KRRLRYKLDE RTFNLSTAGA IDPRLPSLYA ESDGLVGIEQ PRDVVIKLLT EGEGASSQKL KVISIVGPGG
201: LGKTTLANEV FRKLESQFQC RAFVSLSQQP DVKKIVRNIY CQVSQQEYGN IDIWDEEKLI NATREFLTNK RYFVVIDDIW STQAWKTIRC ALFVNNCGSR
301: IMTTTRNMAI AKSCCTPDHD RVFEIMPLSI DNSKSLFLKR IFGSKDVCIP QLDEVCYEIL KKCGGSPLAI ITIASLLANK ANTKEEWERV RNSIGSTLQK
401: DPDVEEMRRI LSLSYDDLPQ HLKTCLLYLS IFPEDYEIER DRLVERWVAE GFIITEGGHD LKEIGDCYFS DLINRSMIEP VKIQYNGRVF SCRVHDMILD
501: LLTCKSTEEN FATFMGGQNQ KLVLQGKVRR LSLNYYTQDH IMVPSTAIIT HCRSLSIFGY AEQKPPLSMF PVLRVLDIEN GEDMESSYTK HIRKLIQLKY
601: LRLNVRSVAE LPEKLGELQH LQTLDLRRTN IRKLPESFVR LQNLTYLRVN NLDLPEGIGH LHALQELTEI RISQDCLASS LLELRNLTKH TLTTKFSPII

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.