Factsheet for Os02t0273000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0629582-00	Rice	cytosol	2.45	7.32
Os06t0163900-01	Rice	cytosol	1.43	3.76
Os10t0132700-01	Rice	cytosol	1.43	2.49
Os02t0272900-01	Rice	cytosol	2.66	1.77
Os11t0629550-00	Rice	cytosol	2.04	1.55
Os11t0265900-02	Rice	cytosol	1.64	0.87
Os11t0238000-00	Rice	cytosol	1.23	0.84
Os11t0249000-01	Rice	cytosol	1.43	0.76
TraesCSU01G135400.1	Wheat	cytosol	1.43	0.75
Os08t0412100-01	Rice	plasma membrane	1.43	0.73
Os12t0564800-01	Rice	plastid	1.43	0.72
Os12t0565100-01	Rice	cytosol	1.02	0.71
Os08t0372700-00	Rice	nucleus	1.23	0.66
OQU83209	Sorghum	cytosol	1.23	0.63
OQU83206	Sorghum	cytosol	1.23	0.63
Os08t0387700-01	Rice	cytosol	1.02	0.54
Os08t0388300-01	Rice	cytosol	1.02	0.51
Os11t0237600-01	Rice	cytosol, nucleus, peroxisome	1.02	0.5
Os01t0335700-01	Rice	cytosol, plasma membrane	0.82	0.48
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	0.82	0.44
Os11t0237900-00	Rice	golgi	0.82	0.43
Os11t0258500-00	Rice	cytosol	0.82	0.41
Os12t0273300-01	Rice	mitochondrion	0.2	0.11
Os11t0238700-00	Rice	cytosol	0.0	0.0
Os08t0411850-00	Rice	cytosol	0.0	0.0
Os08t0176200-01	Rice	plasma membrane	0.0	0.0
Os11t0629600-01	Rice	cytosol	0.0	0.0
Os08t0174800-01	Rice	cytosol	0.0	0.0
Os12t0565200-00	Rice	cytosol	0.0	0.0
TraesCS1D01G045300.1	Wheat	cytosol	0.0	0.0
Os10t0133000-00	Rice	cytosol	0.0	0.0

Protein Annotations

KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	EntrezGene:4328991	MapMan:6.2.2.1
EMBL:AK071021	ProteinID:BAD21822.1	ProteinID:BAD28290.1	ProteinID:BAF08444.1	ProteinID:BAS78071.1	ProteinID:EEE56713.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006206	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016757	GO:GO:0043097	GO:GO:0044206
GO:GO:0044211	EnsemblPlantsGene:Os02g0273000	EnsemblPlants:Os02t0273000-01	InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681
PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF97
UniProt:Q6K7V0	SUPFAM:SSF52540	SUPFAM:SSF53271	TIGRFAMs:TIGR00235	UniParc:UPI0000377CF9	InterPro:Uridine_kinase-like
RefSeq:XP_015627173.1	RefSeq:XP_015627174.1	SEG:seg	:	:	:

Description

Similar to Uridine kinase-like protein. (Os02t0273000-01)

Coordinates

chr2:-:9928936..9937374

Molecular Weight (calculated)

54858.1 Da

IEP (calculated)

7.016

GRAVY (calculated)

-0.183

Length

489 amino acids

Sequence
(BLAST)

001: MGSRPVDEVL DAAAAGVHYS TLRLDELNIN GSMTGEEQPT TSGVENGHQE PFVIGVAGGA SSGKSTVCKM IIDQLRDQRV VVVTQESFYY GLSDEELVHV
101: HDYNFDHPDA FDTELLLSCM ENLKHGKAVD IPNYNFKTYK SVASARKVNP SDVIILEGIL VFHDSRVRDL MNMKIFVDTD ADVRLTRRIR RDTIEKGRDI
201: KTVLDQYSKF VKPAFEDFIL PTKKYADIII PRGGDNDVAI DLIVQHIRTK LGQHDLCKVH PNLYVIQTTY QIRGMHTIIR DAATTTHDFI FYADRLIRLV
301: VEHGLGHLPF KEKQVITPTG SVYTGVEFSK RLCGISVIRS GESMENALRA CCKGIKIGKI LIHREGDNGK QLIYHNLPKD IANRHVLLLD PILGTGNSAV
401: QAISLLLKKG VQETNIIFLN LISAPQGVHV VSKRFPRVKI VTSEIEFGLN DDFRVIPGMG EFGDRYFGTD DYQSSTPFFC DEKNRVRLL

Best Arabidopsis Sequence Match ( AT1G55810.6 )
(BLAST)

001: MASKSDVNII ETSSKVHFSG FHQMDGLASN RPEQMAEEEE HGQPFVIGVA GGAASGKTTV CDMIMQQLHD QRAVVVNQDS FYHNVNEVEL VRVHDYNFDH
101: PDAFDTEQLL SSMEKLRKGQ AVDIPNYDFK SYKNNVFPPR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDADADVRLA RRIKRDTVEK GRDIATVLDQ
201: YSKFVKPAFE DFILPTKKYA DIIIPRGGDN HVAIDLIVQH IHTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDSKTTK HDFIFYSDRL IRLVVEHGLG
301: HLPFTEKQVV TPTGSVYSGV DFCKKLCGVS VIRSGESMEN ALRACCKGIK IGKILIHREG DNGQQLIYEK LPSDISERHV LLLDPILGTG NSAVQAIRLL
401: ISKGVPESNI IFLNLISAPE GVNVVCKKFP RIKIVTSEIE LGLNDEFRVV PGMGEFGDRY FGTDDE

Arabidopsis Description

UKL3uridine kinase-like 3 [Source:TAIR;Acc:AT1G55810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.