Factsheet for Os02t0272900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0629550-00	Rice	cytosol	38.28	43.43
OQU83206	Sorghum	cytosol	55.18	42.36
TraesCSU01G135400.1	Wheat	cytosol	53.27	42.09
Os12t0565100-01	Rice	cytosol	40.05	42.0
Os06t0163900-01	Rice	cytosol	10.63	41.94
OQU83209	Sorghum	cytosol	53.13	40.88
Os10t0132700-01	Rice	cytosol	14.85	38.79
Os11t0238000-00	Rice	cytosol	34.33	35.1
Os12t0273300-01	Rice	mitochondrion	42.64	34.06
Os11t0265900-02	Rice	cytosol	42.37	33.66
Os12t0564800-01	Rice	plastid	44.14	33.3
Os08t0412100-01	Rice	plasma membrane	42.78	32.67
Os11t0258500-00	Rice	cytosol	42.92	32.47
Os11t0249000-01	Rice	cytosol	40.6	32.46
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	39.24	31.34
Os01t0335700-01	Rice	cytosol, plasma membrane	34.88	31.03
Os08t0372700-00	Rice	nucleus	38.28	30.91
Os08t0387700-01	Rice	cytosol	38.69	30.7
TraesCS1D01G045300.1	Wheat	cytosol	18.39	29.74
Os11t0237600-01	Rice	cytosol, nucleus, peroxisome	40.19	29.53
Os08t0388300-01	Rice	cytosol	38.69	29.16
Os11t0237900-00	Rice	golgi	36.65	28.96
Os11t0629600-01	Rice	cytosol	19.89	25.26
Os11t0238700-00	Rice	cytosol	20.3	24.92
Os08t0174800-01	Rice	cytosol	25.07	23.06
Os12t0565200-00	Rice	cytosol	3.0	7.91
Os02t0273000-01	Rice	cytosol, plasma membrane	1.77	2.66
Os08t0176200-01	Rice	plasma membrane	0.54	1.01
Os10t0133000-00	Rice	cytosol	0.0	0.0
Os08t0411850-00	Rice	cytosol	0.0	0.0
Os11t0629582-00	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:BAF08443.1	ProteinID:BAS78070.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	EnsemblPlantsGene:Os02g0272900
EnsemblPlants:Os02t0272900-01	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF21
UniProt:Q0E245	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0000DF065B	SEG:seg

Description

NB-ARC domain containing protein. (Os02t0272900-01)

Coordinates

chr2:-:9923292..9928340

Molecular Weight (calculated)

83593.3 Da

IEP (calculated)

8.633

GRAVY (calculated)

-0.329

Length

734 amino acids

Sequence
(BLAST)

001: MAGAAVSASS GAMNSVIAKL ASLLTDEYTH LKGVKSGIRW LRDELGSMNA VLQRLGDMDD DQIDVQTKEW RNKVRELSYD IEDCIDRFLQ NHSSGDANAN
101: LLQKGVRKMK KLWENHQIGD EIKQLKERVI EEKERHERYK IADRLMVAPQ HVRLDPRVPA LYEQAKNLVG IDKPREQIIG WIKSEEKQLK VVSIFGTGGL
201: GKTTLAMEVY HKIDESFDCR AMVSVSRTPD IKKLLRDILF QINEREYEKS NDWEMEQLIP KLRKNLEDKR YFFIIDDIWS TDAWKQLKSA LPANDNKSRI
301: ITTTRIRDVA KSCCCDFVGH MYEAMPQSEE NSCKLFFRRV FSSEDCPKHL TEAASVILKK CGGLPLAIIS IAGLLSNKNP TVEVWTKIKN SISSMVEKDS
401: PVDKMKRILF LSYFDLPQYL KTCLLYLSVF PEDSNIDPRR LIRLWVAEGL ILGQSRACTE QSGESYLHEL INRSMIQPSK IGADGRVKIC RIHDVILDFI
501: VSQAEEENFV TILNNSDPSD YTSNKFRRLS LQSGFSEGSK MPKASKDLSH LRSLHMFKHE SLPVVPSEFA KCQVLRVLAI KLRLGDNYIK HVGHFCELKY
601: LRIKGGIHKL PEEIGKLQHL QTLDLAYTRI EKLPASIVQL QKLVHLLIPF GVPLPDEIGN LQALEVLSGI DLDRASVKSI YGLGELSKLR DVRIWWSDSN
701: EDNSKEGHRT ACISSLSKLV KCSLQSLRLA RGLS

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.