CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17236	Sorghum	plastid, vacuole	79.76	65.69
OQU79403	Sorghum	endoplasmic reticulum, extracellular	56.35	63.3
EES16086	Sorghum	cytosol	56.35	43.56
EES16173	Sorghum	cytosol	41.8	34.99
OQU79329	Sorghum	plasma membrane	42.46	33.68
EER95860	Sorghum	cytosol	40.74	33.05
KXG28987	Sorghum	cytosol	40.48	33.05
OQU77418	Sorghum	cytosol	30.56	32.95
OQU84038	Sorghum	cytosol	40.08	32.17
KXG25270	Sorghum	cytosol	39.68	31.95
EES08659	Sorghum	cytosol	38.1	31.51
OQU83206	Sorghum	cytosol	39.55	31.28
OQU83209	Sorghum	cytosol	39.42	31.24
OQU80417	Sorghum	plasma membrane	38.62	31.16
KXG36822	Sorghum	cytosol	35.71	30.0
EER97636	Sorghum	cytosol	37.17	29.96
KXG24573	Sorghum	endoplasmic reticulum, golgi, plasma membrane	28.44	28.33
KXG24574	Sorghum	cytosol	37.7	28.27
EES02901	Sorghum	cytosol	29.5	27.43
KXG24334	Sorghum	cytosol	33.2	26.9
KXG21363	Sorghum	cytosol	35.45	22.79

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1Z5R7H8	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
EnsemblPlants:OQU79405	ProteinID:OQU79405	ProteinID:OQU79405.1	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43889	PANTHER:PTHR43889:SF46	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3008G139100	SUPFAM:SSF52047	SUPFAM:SSF52540
UniParc:UPI000B8BB196	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:56847138..56853481

Molecular Weight (calculated)

85996.2 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.173

Length

756 amino acids

Sequence
(BLAST)

001: MWLKEQVLDA WRLDVQLKDW RNKVRELSYD IEDCIDRFMH KMSKEDAGVN LLKKTISMIE KIWARHKIAN LIGELKARVE EEALYVEAQR LLGIDGPREK
101: IIEFMKNDDN GHQLKVVSIV GFGGLGKTTL ANQNPNVAKI LANMLKELGS CVDPSDDERQ LIDKIRAFLQ DKRYFIIVDD IWSTQAWELI NSALPENNLN
201: SRVITTTRIS TVATSCCIGL AGYVHNIQPL SDRQSQQLFL NRVFGDISAC PPHLEEISRG ILKKCHGLPL AIITIASLLA GKSNKGQWEQ VYNSINSAFS
301: HQGMRDILLL SYYDLPYNLK TCLLYLSMCP EDYRINRADL IWRWIAEGFI TEVRGQTVEQ TAESYFNELV NRSLIQPIDI QNDGKAEACR VHDMVLELIV
401: SLSAEENFAC IVEGQSYSGS GHKIRRLSVQ SEHVGDEVMQ QIMDKWSQLP EDIGNLQYLQ TLVIFDTNIR KLPPSIGRLQ KLVRLFVHPD TELPDEIGDL
501: QALQELSGAR MVSTKLVEAL RRLTKLKTLY IHVPTRQELG GDFGRYVEAL KSSLVVMGGH GLQSLTITGN DVLREEQIDL LCSTAPCLWK LHIWGAGITH
601: VPKQMASLVN LTHLDLGIPR IKQEDLCILG GIPALLFCEL DLWHAPDERL TVSSQKFQCL QQFKYKNFRY GGGLEMLFLQ EAMPELRRLE LNFRAQETES
701: KMGFEFSFEH LESLEHIKVV IWIRDATRSR VEAAEAAVRG AVSMHPGRPT LDVKFY

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.