Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64785 | Canola | cytosol | 50.88 | 63.78 |
| Bra027742.1-P | Field mustard | cytosol | 63.56 | 59.55 |
| AT5G41780.1 | Thale cress | cytosol | 45.1 | 52.33 |
| KRH41292 | Soybean | cytosol | 25.84 | 26.44 |
| KRH60016 | Soybean | cytosol | 30.5 | 26.03 |
| Solyc12g056060.1.1 | Tomato | extracellular | 29.05 | 23.75 |
| PGSC0003DMT400012802 | Potato | nucleus | 29.53 | 23.68 |
| PGSC0003DMT400014820 | Potato | nucleus | 29.05 | 20.0 |
| Solyc08g008260.2.1 | Tomato | nucleus | 28.57 | 19.73 |
| AT1G64330.1 | Thale cress | cytosol, mitochondrion, nucleus | 17.18 | 19.28 |
| AT5G41790.2 | Thale cress | nucleus | 23.76 | 9.33 |
Protein Annotations
| Gene3D:1.20.5.340 | MapMan:35.2 | EntrezGene:842738 | UniProt:A0A178W7M7 | UniProt:A0A1P8ASY7 | ProteinID:AEE34226.2 |
| ProteinID:ANM59769.1 | ArrayExpress:AT1G64320 | EnsemblPlantsGene:AT1G64320 | RefSeq:AT1G64320 | TAIR:AT1G64320 | RefSeq:AT1G64320-TAIR-G |
| EnsemblPlants:AT1G64320.1 | TAIR:AT1G64320.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0008150 | GO:GO:0046686 |
| RefSeq:NP_001319318.1 | RefSeq:NP_001322104.1 | ProteinID:OAP13751.1 | PO:PO:0000005 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0007616 | PO:PO:0009046 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF664 |
| UniParc:UPI0007E17FFC | SEG:seg | : | : | : | : |
Description
myosin heavy chain-related [Source:TAIR;Acc:AT1G64320]
Coordinates
chr1:+:23867971..23870703
Molecular Weight (calculated)
72409.5 Da
IEP (calculated)
5.935
GRAVY (calculated)
-0.977
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MERAKTEVEK KVSRLLKFIQ NKNRIPRDSK RELLGIVNDL QEQCQSLYSL CDNFQQDLDP KSGGRRKGIS RVASSSSDLE YYSSEEIDNV VEEGNDICEL
101: QSKIEALRNE AEEKQRELTL RVKELERELG NAKAECDRKG NLEEEIAMKA TESKQLGEKN KGLRSQISGL ESVLKEKGDE ISTLVNKFGN SELGLTSRIE
201: DLKCQLKNLE QEIGFLRARN AGLAGNLEVT KVEEKERVKG LMDQVNGMKH ELESLRSQKD ESEAKLEKKV EEVTETKMQL KSLKEETEEE RNRLSEEIDQ
301: LKGENQMLHR RISELDSLHM EMKTKSAHEM EDASKKLDTE VSDQKKLVKE QDDIIRRLSA KIKDQQRLLK EQKDTIDKFA EDQKQSKRWS FGSSRDLKLN
401: PNALERKMEE LAEDFRMKIE DHIRILYRRI HVAEQIHLES KNEYIKTRDM LKENKENRES LMFFETQFNK MKDALEKGYT GSETAMKKLE EAEEVTNRVA
501: RIGKEMESAK LWVSEKKSEV ETLTAKLECS EAQETLLKEK LSKLEKKLAE EGTEKLKLAK VLSKFETRIK ELEVKVKGRE VELLSLGEEK REAIRQLCIL
601: VDYHQDRYNQ LKKSILKVDD LKT
101: QSKIEALRNE AEEKQRELTL RVKELERELG NAKAECDRKG NLEEEIAMKA TESKQLGEKN KGLRSQISGL ESVLKEKGDE ISTLVNKFGN SELGLTSRIE
201: DLKCQLKNLE QEIGFLRARN AGLAGNLEVT KVEEKERVKG LMDQVNGMKH ELESLRSQKD ESEAKLEKKV EEVTETKMQL KSLKEETEEE RNRLSEEIDQ
301: LKGENQMLHR RISELDSLHM EMKTKSAHEM EDASKKLDTE VSDQKKLVKE QDDIIRRLSA KIKDQQRLLK EQKDTIDKFA EDQKQSKRWS FGSSRDLKLN
401: PNALERKMEE LAEDFRMKIE DHIRILYRRI HVAEQIHLES KNEYIKTRDM LKENKENRES LMFFETQFNK MKDALEKGYT GSETAMKKLE EAEEVTNRVA
501: RIGKEMESAK LWVSEKKSEV ETLTAKLECS EAQETLLKEK LSKLEKKLAE EGTEKLKLAK VLSKFETRIK ELEVKVKGRE VELLSLGEEK REAIRQLCIL
601: VDYHQDRYNQ LKKSILKVDD LKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.