Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67506 | Canola | cytosol | 64.8 | 67.84 |
| Bra028505.1-P | Field mustard | cytosol | 64.25 | 67.51 |
| CDY71570 | Canola | endoplasmic reticulum | 62.2 | 63.02 |
| AT1G64320.1 | Thale cress | cytosol | 52.33 | 45.1 |
| KRH41292 | Soybean | cytosol | 25.14 | 22.17 |
| KRH60016 | Soybean | cytosol | 29.05 | 21.37 |
| Solyc12g056060.1.1 | Tomato | extracellular | 29.24 | 20.6 |
| PGSC0003DMT400012802 | Potato | nucleus | 29.61 | 20.46 |
| AT1G64330.1 | Thale cress | cytosol, mitochondrion, nucleus | 18.62 | 18.02 |
| PGSC0003DMT400014820 | Potato | nucleus | 26.44 | 15.69 |
| Solyc08g008260.2.1 | Tomato | nucleus | 25.7 | 15.3 |
| AT5G41790.2 | Thale cress | nucleus | 23.46 | 7.94 |
Protein Annotations
| MapMan:35.2 | EntrezGene:834183 | ProteinID:AED94728.1 | ProteinID:ANM70379.1 | ProteinID:ANM70380.1 | ProteinID:ANM70381.1 |
| ArrayExpress:AT5G41780 | EnsemblPlantsGene:AT5G41780 | RefSeq:AT5G41780 | TAIR:AT5G41780 | RefSeq:AT5G41780-TAIR-G | EnsemblPlants:AT5G41780.1 |
| TAIR:AT5G41780.1 | ProteinID:BAB10653.1 | ncoils:Coil | EMBL:DQ447029 | GO:GO:0008150 | RefSeq:NP_001318725.1 |
| RefSeq:NP_001331995.1 | RefSeq:NP_001331996.1 | RefSeq:NP_198993.1 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF664 | UniProt:Q9FJ36 | UniParc:UPI00000A9AD7 |
| SEG:seg | : | : | : | : | : |
Description
Myosin heavy chain-like [Source:UniProtKB/TrEMBL;Acc:Q9FJ36]
Coordinates
chr5:+:16722421..16725040
Molecular Weight (calculated)
62739.5 Da
IEP (calculated)
7.856
GRAVY (calculated)
-0.909
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAKTEVEK KVSILLKFIQ NKNKIPKVTK KELVGIVEDL HKQCQLLYSV FDDFGTDGRK GKLGTASSSR SSSDLDYYSS EEVEISADNV SDTLSSDYDV
101: MLRKLQETEL RNEDLERQVS NLKQETVFLR DQNMEVAGDI EGKRNEDREH LKGLMTKLEA ALLCNQKREL EMELVKKTNQ VSETQMRLKR LEEETEKRAK
201: AEMKIVKEKE ALWNKVQKLE AGVDTFRKKR KEFNEEMKSK ITENQKLHTK IAVIDEIEDK SKKLEYQVKE QEDIIQRLSM EIKDQKKLLK EQKDAIDKFS
301: EDQKLMKRWS FGSKLNTNLL EKKMEELAED FRMKMEDHIR ILHRRIHVAE QIHLESKSSY IKTRDNTQTE ENRGNRAVSE TQFKKIKEMV EQGLAGPEMA
401: IKKLEESGEL GNRVTRLAKE IDSARKWVKE KDNNMKHEVE TLEAKLECRE AQESLLKEKL SKLEAKLAEE GTEKLSLSKA MRKIKKLEIN VKEKEFELLS
501: LGEGKREAIR QLCVLVDYQR CRYDDLKTSI CHVALQA
101: MLRKLQETEL RNEDLERQVS NLKQETVFLR DQNMEVAGDI EGKRNEDREH LKGLMTKLEA ALLCNQKREL EMELVKKTNQ VSETQMRLKR LEEETEKRAK
201: AEMKIVKEKE ALWNKVQKLE AGVDTFRKKR KEFNEEMKSK ITENQKLHTK IAVIDEIEDK SKKLEYQVKE QEDIIQRLSM EIKDQKKLLK EQKDAIDKFS
301: EDQKLMKRWS FGSKLNTNLL EKKMEELAED FRMKMEDHIR ILHRRIHVAE QIHLESKSSY IKTRDNTQTE ENRGNRAVSE TQFKKIKEMV EQGLAGPEMA
401: IKKLEESGEL GNRVTRLAKE IDSARKWVKE KDNNMKHEVE TLEAKLECRE AQESLLKEKL SKLEAKLAEE GTEKLSLSKA MRKIKKLEIN VKEKEFELLS
501: LGEGKREAIR QLCVLVDYQR CRYDDLKTSI CHVALQA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.