Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67506 | Canola | cytosol | 85.66 | 88.5 |
| AT5G41780.1 | Thale cress | cytosol | 63.02 | 62.2 |
| CDY64785 | Canola | cytosol | 36.42 | 38.83 |
| CDX82737 | Canola | nucleus | 8.87 | 21.96 |
| CDX67508 | Canola | cytosol | 8.68 | 21.5 |
| KRH41292 | Soybean | cytosol | 23.21 | 20.2 |
| KRH60016 | Soybean | cytosol | 26.42 | 19.18 |
| PGSC0003DMT400012802 | Potato | nucleus | 27.36 | 18.66 |
| Solyc12g056060.1.1 | Tomato | extracellular | 26.6 | 18.5 |
| CDY47855 | Canola | cytosol, mitochondrion, nucleus | 16.04 | 16.9 |
| CDY64783 | Canola | cytosol, mitochondrion, nucleus | 15.66 | 16.5 |
| CDY27680 | Canola | nucleus | 7.55 | 15.87 |
| CDY27679 | Canola | cytosol | 12.83 | 15.14 |
| PGSC0003DMT400014820 | Potato | nucleus | 24.34 | 14.25 |
| Solyc08g008260.2.1 | Tomato | nucleus | 24.15 | 14.19 |
| CDX77396 | Canola | nucleus | 7.92 | 12.1 |
| CDY49873 | Canola | nucleus | 14.34 | 11.62 |
| CDY49872 | Canola | cytosol | 8.11 | 11.53 |
| CDY44989 | Canola | nucleus | 9.81 | 11.16 |
| CDY68594 | Canola | nucleus | 13.77 | 9.61 |
| CDX67507 | Canola | nucleus | 14.15 | 5.75 |
Protein Annotations
| EnsemblPlants:CDY71570 | EnsemblPlantsGene:GSBRNA2T00017259001 | ncoils:Coil | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF664 | ProteinID:CDY71570 |
| ProteinID:CDY71570.1 | SEG:seg | UniParc:UPI0004EE9376 | UniProt:A0A078JYS1 | MapMan:35.2 | : |
Description
BnaCnng73470DBnaCnng73470D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JYS1]
Coordinates
chrLK046417:-:719..2403
Molecular Weight (calculated)
61317.6 Da
IEP (calculated)
7.962
GRAVY (calculated)
-0.894
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: YDEANVSKLS LSLYIYICCS TCAEVEKKVT TLLKYIQNKN KIPNVAKKEL VGIVNDLHEQ CQLLYSLYHH DLESGGRKGK PGAAAAASSS RSSSDLDYFS
101: SEETEISTGN VSETLSSDYA AMLRKIQETE STNEDLKRQV SSLKQEMEQA GNVIGKRNED RNHLMTKGEV ALLRNQKDEL ASKLKKKTDE ASEIHMKLKR
201: LEGEKEKRAK AELKNVEEKE ALRNKVQKLD HLREENHKMH ARIADLDSLQ KERQMKNIDE IEDKSKKQED TIHRLSMEIK DRKKLVKEQK DVIDKFSEDQ
301: KLMKRWSIGS KLNTNLLERK MEELSEDFQM KMEDRIRILY RRIHVAEQIH LESKNNYMNT QTQGNRGDYT VSETQFEKIK EMVDNGLAGP EMIVKKLEEG
401: DELTTKVTRL AKEIDSARKW VYEKNSKMKH EVETLEAKLE CSEAQETLLK EKLSKLEGKL GEEGTGKMSV EKAMRRIKKL EINVKERDVE LMCLGEEKRE
501: AIRQLCVLVD YQRCRYDDLK TSICKVALQA
101: SEETEISTGN VSETLSSDYA AMLRKIQETE STNEDLKRQV SSLKQEMEQA GNVIGKRNED RNHLMTKGEV ALLRNQKDEL ASKLKKKTDE ASEIHMKLKR
201: LEGEKEKRAK AELKNVEEKE ALRNKVQKLD HLREENHKMH ARIADLDSLQ KERQMKNIDE IEDKSKKQED TIHRLSMEIK DRKKLVKEQK DVIDKFSEDQ
301: KLMKRWSIGS KLNTNLLERK MEELSEDFQM KMEDRIRILY RRIHVAEQIH LESKNNYMNT QTQGNRGDYT VSETQFEKIK EMVDNGLAGP EMIVKKLEEG
401: DELTTKVTRL AKEIDSARKW VYEKNSKMKH EVETLEAKLE CSEAQETLLK EKLSKLEGKL GEEGTGKMSV EKAMRRIKKL EINVKERDVE LMCLGEEKRE
501: AIRQLCVLVD YQRCRYDDLK TSICKVALQA
001: MEEAKTEVEK KVSILLKFIQ NKNKIPKVTK KELVGIVEDL HKQCQLLYSV FDDFGTDGRK GKLGTASSSR SSSDLDYYSS EEVEISADNV SDTLSSDYDV
101: MLRKLQETEL RNEDLERQVS NLKQETVFLR DQNMEVAGDI EGKRNEDREH LKGLMTKLEA ALLCNQKREL EMELVKKTNQ VSETQMRLKR LEEETEKRAK
201: AEMKIVKEKE ALWNKVQKLE AGVDTFRKKR KEFNEEMKSK ITENQKLHTK IAVIDEIEDK SKKLEYQVKE QEDIIQRLSM EIKDQKKLLK EQKDAIDKFS
301: EDQKLMKRWS FGSKLNTNLL EKKMEELAED FRMKMEDHIR ILHRRIHVAE QIHLESKSSY IKTRDNTQTE ENRGNRAVSE TQFKKIKEMV EQGLAGPEMA
401: IKKLEESGEL GNRVTRLAKE IDSARKWVKE KDNNMKHEVE TLEAKLECRE AQESLLKEKL SKLEAKLAEE GTEKLSLSKA MRKIKKLEIN VKEKEFELLS
501: LGEGKREAIR QLCVLVDYQR CRYDDLKTSI CHVALQA
101: MLRKLQETEL RNEDLERQVS NLKQETVFLR DQNMEVAGDI EGKRNEDREH LKGLMTKLEA ALLCNQKREL EMELVKKTNQ VSETQMRLKR LEEETEKRAK
201: AEMKIVKEKE ALWNKVQKLE AGVDTFRKKR KEFNEEMKSK ITENQKLHTK IAVIDEIEDK SKKLEYQVKE QEDIIQRLSM EIKDQKKLLK EQKDAIDKFS
301: EDQKLMKRWS FGSKLNTNLL EKKMEELAED FRMKMEDHIR ILHRRIHVAE QIHLESKSSY IKTRDNTQTE ENRGNRAVSE TQFKKIKEMV EQGLAGPEMA
401: IKKLEESGEL GNRVTRLAKE IDSARKWVKE KDNNMKHEVE TLEAKLECRE AQESLLKEKL SKLEAKLAEE GTEKLSLSKA MRKIKKLEIN VKEKEFELLS
501: LGEGKREAIR QLCVLVDYQR CRYDDLKTSI CHVALQA
Arabidopsis Description
Myosin heavy chain-like [Source:UniProtKB/TrEMBL;Acc:Q9FJ36]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.