Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49872 | Canola | cytosol | 63.11 | 58.71 |
| CDY27679 | Canola | cytosol | 65.71 | 50.78 |
| CDY44989 | Canola | nucleus | 66.86 | 49.79 |
| CDX82737 | Canola | nucleus | 19.31 | 31.31 |
| CDX67508 | Canola | cytosol | 19.02 | 30.84 |
| CDY47855 | Canola | cytosol, mitochondrion, nucleus | 26.22 | 18.09 |
| CDY64783 | Canola | cytosol, mitochondrion, nucleus | 25.94 | 17.89 |
| KRH60017 | Soybean | cytosol | 37.75 | 10.85 |
| CDY64785 | Canola | cytosol | 13.54 | 9.46 |
| KRH41293 | Soybean | cytosol | 36.6 | 9.0 |
| VIT_02s0025g01170.t01 | Wine grape | nucleus | 36.6 | 8.67 |
| CDX67506 | Canola | cytosol | 12.1 | 8.19 |
| CDY71570 | Canola | endoplasmic reticulum | 12.1 | 7.92 |
| CDX67507 | Canola | nucleus | 24.5 | 6.51 |
| CDY27680 | Canola | nucleus | 4.32 | 5.95 |
| CDY68594 | Canola | nucleus | 12.39 | 5.66 |
| CDY49873 | Canola | nucleus | 10.37 | 5.5 |
Protein Annotations
| EnsemblPlants:CDX77396 | EnsemblPlantsGene:GSBRNA2T00128230001 | ncoils:Coil | ProteinID:CDX77396 | ProteinID:CDX77396.1 | SEG:seg |
| UniParc:UPI0004EE14A2 | MapMan:35.1 | : | : | : | : |
Description
BnaA07g05340D
Coordinates
chrLK031811:+:236585..238308
Molecular Weight (calculated)
40130.1 Da
IEP (calculated)
4.713
GRAVY (calculated)
-1.109
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MSESGQLKES HNEKDKELLS LRDIHETHQR ESSTQLRDLE AQLKSSEQRV SDLNEKLEAT IGTDEEKQSS STTESLTAEI DGLRAGLESL SAQKEELEKL
101: MDSKGDEALM QIKLMDKINK ASADTVALTE QINSLQHQLD SLKMKKSETK SELDREKQEK SDLSNQIIDV KKALIEQEAA YYTLGEEHKQ INQLLKERDE
201: ELNKLTEDHK EAQRLLEETS NEVSSRDSAI AGHEEKMESL RNELETKGAE IETLMEKISN IEVKLRLSNQ KLRVTEQVLT EKEEAFRREE AKHLEEQALL
301: EKSLTMTHEA HRQGEEIKKL GEKLIEDEKE KERMRLWLDL EKRKEKQ
101: MDSKGDEALM QIKLMDKINK ASADTVALTE QINSLQHQLD SLKMKKSETK SELDREKQEK SDLSNQIIDV KKALIEQEAA YYTLGEEHKQ INQLLKERDE
201: ELNKLTEDHK EAQRLLEETS NEVSSRDSAI AGHEEKMESL RNELETKGAE IETLMEKISN IEVKLRLSNQ KLRVTEQVLT EKEEAFRREE AKHLEEQALL
301: EKSLTMTHEA HRQGEEIKKL GEKLIEDEKE KERMRLWLDL EKRKEKQ
001: MERAKTEVEK KVSRLLKFIQ NKNRIPRDSK RELLGIVNDL QEQCQSLYSL CDNFQQDLDP KSGGRRKGIS RVASSSSDLE YYSSEEIDNV VEEGNDICEL
101: QSKIEALRNE AEEKQRELTL RVKELERELG NAKAECDRKG NLEEEIAMKA TESKQLGEKN KGLRSQISGL ESVLKEKGDE ISTLVNKFGN SELGLTSRIE
201: DLKCQLKNLE QEIGFLRARN AGLAGNLEVT KVEEKERVKG LMDQVNGMKH ELESLRSQKD ESEAKLEKKV EEVTETKMQL KSLKEETEEE RNRLSEEIDQ
301: LKGENQMLHR RISELDSLHM EMKTKSAHEM EDASKKLDTE VSDQKKLVKE QDDIIRRLSA KIKDQQRLLK EQKDTIDKFA EDQKQSKRWS FGSSRDLKLN
401: PNALERKMEE LAEDFRMKIE DHIRILYRRI HVAEQIHLES KNEYIKTRDM LKENKENRES LMFFETQFNK MKDALEKGYT GSETAMKKLE EAEEVTNRVA
501: RIGKEMESAK LWVSEKKSEV ETLTAKLECS EAQETLLKEK LSKLEKKLAE EGTEKLKLAK VLSKFETRIK ELEVKVKGRE VELLSLGEEK REAIRQLCIL
601: VDYHQDRYNQ LKKSILKVDD LKT
101: QSKIEALRNE AEEKQRELTL RVKELERELG NAKAECDRKG NLEEEIAMKA TESKQLGEKN KGLRSQISGL ESVLKEKGDE ISTLVNKFGN SELGLTSRIE
201: DLKCQLKNLE QEIGFLRARN AGLAGNLEVT KVEEKERVKG LMDQVNGMKH ELESLRSQKD ESEAKLEKKV EEVTETKMQL KSLKEETEEE RNRLSEEIDQ
301: LKGENQMLHR RISELDSLHM EMKTKSAHEM EDASKKLDTE VSDQKKLVKE QDDIIRRLSA KIKDQQRLLK EQKDTIDKFA EDQKQSKRWS FGSSRDLKLN
401: PNALERKMEE LAEDFRMKIE DHIRILYRRI HVAEQIHLES KNEYIKTRDM LKENKENRES LMFFETQFNK MKDALEKGYT GSETAMKKLE EAEEVTNRVA
501: RIGKEMESAK LWVSEKKSEV ETLTAKLECS EAQETLLKEK LSKLEKKLAE EGTEKLKLAK VLSKFETRIK ELEVKVKGRE VELLSLGEEK REAIRQLCIL
601: VDYHQDRYNQ LKKSILKVDD LKT
Arabidopsis Description
myosin heavy chain-related [Source:TAIR;Acc:AT1G64320]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.