Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27679 | Canola | cytosol | 86.6 | 71.94 |
| CDY44989 | Canola | nucleus | 81.23 | 65.02 |
| CDX77396 | Canola | nucleus | 58.71 | 63.11 |
| CDX67508 | Canola | cytosol | 15.28 | 26.64 |
| CDX82737 | Canola | nucleus | 15.01 | 26.17 |
| CDY47855 | Canola | cytosol, mitochondrion, nucleus | 27.08 | 20.08 |
| CDY64783 | Canola | cytosol, mitochondrion, nucleus | 27.08 | 20.08 |
| KRH60017 | Soybean | cytosol | 35.92 | 11.1 |
| CDY27680 | Canola | nucleus | 6.7 | 9.92 |
| KRH41293 | Soybean | cytosol | 34.85 | 9.21 |
| VIT_02s0025g01170.t01 | Wine grape | nucleus | 35.92 | 9.15 |
| CDX67506 | Canola | cytosol | 12.06 | 8.77 |
| CDY71570 | Canola | endoplasmic reticulum | 11.53 | 8.11 |
| CDY49873 | Canola | nucleus | 13.67 | 7.8 |
| CDY68594 | Canola | nucleus | 15.01 | 7.37 |
| CDY64785 | Canola | cytosol | 9.65 | 7.24 |
| CDX67507 | Canola | nucleus | 17.16 | 4.9 |
Protein Annotations
| EnsemblPlants:CDY49872 | EnsemblPlantsGene:GSBRNA2T00094011001 | ncoils:Coil | ProteinID:CDY49872 | ProteinID:CDY49872.1 | SEG:seg |
| UniParc:UPI0004EEC3C2 | UniProt:A0A078IIX0 | MapMan:35.1 | : | : | : |
Description
BnaA04g11420DBnaA04g11420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIX0]
Coordinates
chrLK032865:-:22020..23664
Molecular Weight (calculated)
42632.0 Da
IEP (calculated)
4.571
GRAVY (calculated)
-0.970
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MSESGQLKES HTEKDKELLG LRDIHETHQR ESSTQLRDLE AQLKSSEQRV SDLSESLKIA EEENKSMSTK ISDTSGELER VQITLQELTV ESSKLKEKLA
101: EKEAELLHLT EKESKSQLQI KELEATDKEK QSSSTVESLT AEIDGLRAGD SVSAQKEELE KVMESKGDEA SMQIKEILQM QDKINKASAD TVALTEQINN
201: MQHELESLQV KKSEVESELD REKQEKSDLS NQIIDVKKAL VEQEAAYNTL GEELRQIKVL LKEREEALNK LTEDHKEAQR LLEETGNEVS SRDSAIAGHE
301: ETMERLRNEL EVKGEEIETL MEKISNIEVK LRLSNQKLRV TEQVLTEKEE AFRREEAKHL EEQAVLEKSL KRK
101: EKEAELLHLT EKESKSQLQI KELEATDKEK QSSSTVESLT AEIDGLRAGD SVSAQKEELE KVMESKGDEA SMQIKEILQM QDKINKASAD TVALTEQINN
201: MQHELESLQV KKSEVESELD REKQEKSDLS NQIIDVKKAL VEQEAAYNTL GEELRQIKVL LKEREEALNK LTEDHKEAQR LLEETGNEVS SRDSAIAGHE
301: ETMERLRNEL EVKGEEIETL MEKISNIEVK LRLSNQKLRV TEQVLTEKEE AFRREEAKHL EEQAVLEKSL KRK
001: MRKLSIRDSL KSFFEPHLHP DNGESLKGTK TEIDEKVKKI LGIVESGDIE EDESKRLVVA ELVKDFYKEY ESLYHQYDDL TGEIRKKVHG KGENDSSSSS
101: SSDSDSDKKS KRNGRGENEI ELLKKQMEDA NLEIADLKMK LATTDEHKEA VESEHQEILK KLKESDEICG NLRVETEKLT SENKELNEKL EVAGETESDL
201: NQKLEDVKKE RDGLEAELAS KAKDHESTLE EVNRLQGQKN ETEAELEREK QEKPALLNQI NDVQKALLEQ EAAYNTLSQE HKQINGLFEE REATIKKLTD
301: DYKQAREMLE EYMSKMEETE RRMQETGKDV ASRESAIVDL EETVESLRNE VERKGDEIES LMEKMSNIEV KLRLSNQKLR VTEQVLTEKE GELKRIEAKH
401: LEEQALLEEK IATTHETYRG LIKEISERVD STILNRFQSL SEKLEEKHKS YEKTVVEATK MLLTAKKCVV EMKKEKDEMA KEKEEVEKKL EGQVREEEKE
501: KEKLKETLLG LGEEKREAIR QLCIWIEHHR DRCEYLEEVL SKMVVARGQR RSQRA
101: SSDSDSDKKS KRNGRGENEI ELLKKQMEDA NLEIADLKMK LATTDEHKEA VESEHQEILK KLKESDEICG NLRVETEKLT SENKELNEKL EVAGETESDL
201: NQKLEDVKKE RDGLEAELAS KAKDHESTLE EVNRLQGQKN ETEAELEREK QEKPALLNQI NDVQKALLEQ EAAYNTLSQE HKQINGLFEE REATIKKLTD
301: DYKQAREMLE EYMSKMEETE RRMQETGKDV ASRESAIVDL EETVESLRNE VERKGDEIES LMEKMSNIEV KLRLSNQKLR VTEQVLTEKE GELKRIEAKH
401: LEEQALLEEK IATTHETYRG LIKEISERVD STILNRFQSL SEKLEEKHKS YEKTVVEATK MLLTAKKCVV EMKKEKDEMA KEKEEVEKKL EGQVREEEKE
501: KEKLKETLLG LGEEKREAIR QLCIWIEHHR DRCEYLEEVL SKMVVARGQR RSQRA
Arabidopsis Description
At1g64330 [Source:UniProtKB/TrEMBL;Acc:Q9C7V7]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.