Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67508 | Canola | cytosol | 90.19 | 90.19 |
| CDY27679 | Canola | cytosol | 52.8 | 25.17 |
| CDY64783 | Canola | cytosol, mitochondrion, nucleus | 57.48 | 24.45 |
| CDY47855 | Canola | cytosol, mitochondrion, nucleus | 57.01 | 24.25 |
| CDX77396 | Canola | nucleus | 31.31 | 19.31 |
| CDY49872 | Canola | cytosol | 26.17 | 15.01 |
| CDY44989 | Canola | nucleus | 31.78 | 14.59 |
| CDY64785 | Canola | cytosol | 21.96 | 9.46 |
| CDX67506 | Canola | cytosol | 22.43 | 9.36 |
| CDY71570 | Canola | endoplasmic reticulum | 21.96 | 8.87 |
| KRH60017 | Soybean | cytosol | 37.85 | 6.71 |
| VIT_02s0025g01170.t01 | Wine grape | nucleus | 45.33 | 6.63 |
| KRH41293 | Soybean | cytosol | 37.38 | 5.67 |
| CDY49873 | Canola | nucleus | 15.42 | 5.05 |
| CDY27680 | Canola | nucleus | 4.67 | 3.97 |
| CDY68594 | Canola | nucleus | 9.81 | 2.76 |
| CDX67507 | Canola | nucleus | 16.82 | 2.76 |
Protein Annotations
| EnsemblPlants:CDX82737 | EnsemblPlantsGene:GSBRNA2T00138023001 | ncoils:Coil | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF694 | ProteinID:CDX82737 |
| ProteinID:CDX82737.1 | SEG:seg | UniParc:UPI0004EE34E1 | MapMan:35.1 | : | : |
Description
BnaC07g01290D
Coordinates
chrLK031829:+:1784321..1784965
Molecular Weight (calculated)
25306.6 Da
IEP (calculated)
8.230
GRAVY (calculated)
-1.005
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLRNELEM KGDEIGTLME KISNIEVKLR LSNQKLRVTE QVLTEKEEAF RREEARHLEE HALLEKSLTV THETYRGMIK EVAEKVNTAL DGFQSMSGNI
101: TEKQGKYKKT VMEASKLLWT ATNWVIERNH EKEKMKKEME RKKKEIKKLE EKMREDEKEK ETIKETLMGL GEEKREAIRQ LCVWIDHHSG RCEYLEEILS
201: KTVVTRGQRQ SQRA
101: TEKQGKYKKT VMEASKLLWT ATNWVIERNH EKEKMKKEME RKKKEIKKLE EKMREDEKEK ETIKETLMGL GEEKREAIRQ LCVWIDHHSG RCEYLEEILS
201: KTVVTRGQRQ SQRA
001: MRKLSIRDSL KSFFEPHLHP DNGESLKGTK TEIDEKVKKI LGIVESGDIE EDESKRLVVA ELVKDFYKEY ESLYHQYDDL TGEIRKKVHG KGENDSSSSS
101: SSDSDSDKKS KRNGRGENEI ELLKKQMEDA NLEIADLKMK LATTDEHKEA VESEHQEILK KLKESDEICG NLRVETEKLT SENKELNEKL EVAGETESDL
201: NQKLEDVKKE RDGLEAELAS KAKDHESTLE EVNRLQGQKN ETEAELEREK QEKPALLNQI NDVQKALLEQ EAAYNTLSQE HKQINGLFEE REATIKKLTD
301: DYKQAREMLE EYMSKMEETE RRMQETGKDV ASRESAIVDL EETVESLRNE VERKGDEIES LMEKMSNIEV KLRLSNQKLR VTEQVLTEKE GELKRIEAKH
401: LEEQALLEEK IATTHETYRG LIKEISERVD STILNRFQSL SEKLEEKHKS YEKTVVEATK MLLTAKKCVV EMKKEKDEMA KEKEEVEKKL EGQVREEEKE
501: KEKLKETLLG LGEEKREAIR QLCIWIEHHR DRCEYLEEVL SKMVVARGQR RSQRA
101: SSDSDSDKKS KRNGRGENEI ELLKKQMEDA NLEIADLKMK LATTDEHKEA VESEHQEILK KLKESDEICG NLRVETEKLT SENKELNEKL EVAGETESDL
201: NQKLEDVKKE RDGLEAELAS KAKDHESTLE EVNRLQGQKN ETEAELEREK QEKPALLNQI NDVQKALLEQ EAAYNTLSQE HKQINGLFEE REATIKKLTD
301: DYKQAREMLE EYMSKMEETE RRMQETGKDV ASRESAIVDL EETVESLRNE VERKGDEIES LMEKMSNIEV KLRLSNQKLR VTEQVLTEKE GELKRIEAKH
401: LEEQALLEEK IATTHETYRG LIKEISERVD STILNRFQSL SEKLEEKHKS YEKTVVEATK MLLTAKKCVV EMKKEKDEMA KEKEEVEKKL EGQVREEEKE
501: KEKLKETLLG LGEEKREAIR QLCIWIEHHR DRCEYLEEVL SKMVVARGQR RSQRA
Arabidopsis Description
At1g64330 [Source:UniProtKB/TrEMBL;Acc:Q9C7V7]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.