Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64330.1 | KRH14106 | AT5G35750.1 | 18642946 |
| AT1G64330.1 | KRH74010 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41293 | Soybean | cytosol | 90.97 | 77.82 |
| CDX67508 | Canola | cytosol | 6.96 | 39.25 |
| CDX82737 | Canola | nucleus | 6.71 | 37.85 |
| CDX77396 | Canola | nucleus | 10.85 | 37.75 |
| CDY27679 | Canola | cytosol | 13.59 | 36.53 |
| CDY49872 | Canola | cytosol | 11.1 | 35.92 |
| Bra027741.1-P | Field mustard | cytosol, mitochondrion, nucleus | 14.91 | 35.79 |
| CDY64783 | Canola | cytosol, mitochondrion, nucleus | 14.75 | 35.39 |
| CDY47855 | Canola | cytosol, mitochondrion, nucleus | 14.75 | 35.39 |
| VIT_02s0025g01170.t01 | Wine grape | nucleus | 42.67 | 35.18 |
| AT1G64330.1 | Thale cress | cytosol, mitochondrion, nucleus | 15.99 | 34.77 |
| CDY44989 | Canola | nucleus | 12.92 | 33.48 |
| CDY27680 | Canola | nucleus | 6.71 | 32.14 |
| KRH60016 | Soybean | cytosol | 17.9 | 29.59 |
| KRH41292 | Soybean | cytosol | 14.08 | 27.91 |
| Bra025461.1-P | Field mustard | nucleus | 28.83 | 27.62 |
| CDY68594 | Canola | nucleus | 15.41 | 24.47 |
| CDY49873 | Canola | nucleus | 12.43 | 22.94 |
| AT5G41790.2 | Thale cress | nucleus | 28.83 | 21.94 |
| Bra028506.1-P | Field mustard | nucleus | 28.75 | 21.77 |
| CDX67507 | Canola | nucleus | 22.62 | 20.92 |
Protein Annotations
| EMBL:ACUP02003347 | EnsemblPlants:KRH60017 | EnsemblPlantsGene:GLYMA_05G215100 | EntrezGene:100812919 | Gene3D:1.20.5.340 | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011684 | InterPro:NAB | ncoils:Coil |
| PANTHER:PTHR13140 | PANTHER:PTHR13140:SF664 | PFAM:PF07765 | PFscan:PS51774 | ProteinID:KRH60017 | ProteinID:KRH60017.1 |
| ProteinID:KRH60018.1 | SEG:seg | UniParc:UPI00023C52DD | UniProt:I1K6B1 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr5:+:39591069..39596913
Molecular Weight (calculated)
139477.0 Da
IEP (calculated)
4.605
GRAVY (calculated)
-0.939
Length
1207 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKHRFRESI KSLFGSHIDS NKEEQLQEAK AEIEDKVKRI LKLIKEDNLE EDGTPVEHSK KEPLVELIED FHNQYQSLYA QYDHLTGELR KKIKGKREKG
0101: SSSSSSDSDS DSDYSSKDRD NKNGQLENEF QKTIHDLRQE LEVVHIEVAE LNRKLTITHE EKEDLNSKYL AALSKIQEAD KINMDLKTDA EALGTQRLKL
0201: LVENAELNKQ LDTAGKIEVE LSQKLEDLTA EKDSLTMEKE TALQQIEEEK KITDGLRTLV DQLKDENLAL GKELEAVTGE FSILKQQLEH AEQQMTDIRH
0301: NLKVAEEENE SLKVKLSQAS NEVHLAHNRI QDFVAESSQL KEKLDESGRE ISALTQMHEG YQKESSNQIR ELEAQATTLE QELESLQNQK RDMEEQIKSS
0401: TTEAGELGEL NSGLQNQISE LEIKSREREE ELSAMMKKLK DNENESSSKM SDLTSQIDKL LADIGTLHAQ KNELEEQIIS KSDEASTQVK SITNELNALR
0501: QEVESLQHQK LDLEFQLVEK VQENSEYVIQ MQTLKEEIDR KILEQERLLE DKENLAMKLR TLELEMNTIK NKNSEAEEQI RAKSHEISHM SKGMLELHEK
0601: IAEIEKISTD RESHFLVLQD KFINAEQVVS AKIKVSSEQI KNLEHDLASL HQEKQELEQQ CEKMKLEVDS IQNQKSEIEE QMRAKDHENS GLREENLGFQ
0701: GTITVQENTL AEKEAELSSL QEKLHEKESE ASGQITAFTV QIDNLKHDLV SWQNEKQELE QQCEKLKMEL DSTNNQTGEI EEQLIAKDHE NTELREEILR
0801: LQEAIAALEK TLAEKESELS TLQEKLHEKE SEASGQIIAF TSQIDNLQKD LLSFQKTKEE LELHCEKISE EHAQSLVMVE NEKNDISSRT MDLKRSLEER
0901: EDSYQKLNEE YKQIDSLFKE CMVKLEVAEK KIEEMAGEFH EGIESKDKKV ADLEHTVEEL KRDLEEKGDE ISTSVENVRM LEVKLRLSNQ KLRVTEQLLS
1001: EKEESFRKAE EKFQQDQRAL EDRIATLSAI ITANSEAFDE IVSNLKERVN NVTTGIETIS WKVSDDCKNF EDSISNISHE LGVAKDHVRE MNREKEQLKR
1101: DKNHLLEQLQ IKKEQEVALR KSVEKLEAKA SKEESEKMNL TTTVVQLNRT VGELEKKMKE KEDGMLDLGE EKREVIRQLC LWIDYHRSRY DYLKDILSKS
1201: RRGQSAA
0101: SSSSSSDSDS DSDYSSKDRD NKNGQLENEF QKTIHDLRQE LEVVHIEVAE LNRKLTITHE EKEDLNSKYL AALSKIQEAD KINMDLKTDA EALGTQRLKL
0201: LVENAELNKQ LDTAGKIEVE LSQKLEDLTA EKDSLTMEKE TALQQIEEEK KITDGLRTLV DQLKDENLAL GKELEAVTGE FSILKQQLEH AEQQMTDIRH
0301: NLKVAEEENE SLKVKLSQAS NEVHLAHNRI QDFVAESSQL KEKLDESGRE ISALTQMHEG YQKESSNQIR ELEAQATTLE QELESLQNQK RDMEEQIKSS
0401: TTEAGELGEL NSGLQNQISE LEIKSREREE ELSAMMKKLK DNENESSSKM SDLTSQIDKL LADIGTLHAQ KNELEEQIIS KSDEASTQVK SITNELNALR
0501: QEVESLQHQK LDLEFQLVEK VQENSEYVIQ MQTLKEEIDR KILEQERLLE DKENLAMKLR TLELEMNTIK NKNSEAEEQI RAKSHEISHM SKGMLELHEK
0601: IAEIEKISTD RESHFLVLQD KFINAEQVVS AKIKVSSEQI KNLEHDLASL HQEKQELEQQ CEKMKLEVDS IQNQKSEIEE QMRAKDHENS GLREENLGFQ
0701: GTITVQENTL AEKEAELSSL QEKLHEKESE ASGQITAFTV QIDNLKHDLV SWQNEKQELE QQCEKLKMEL DSTNNQTGEI EEQLIAKDHE NTELREEILR
0801: LQEAIAALEK TLAEKESELS TLQEKLHEKE SEASGQIIAF TSQIDNLQKD LLSFQKTKEE LELHCEKISE EHAQSLVMVE NEKNDISSRT MDLKRSLEER
0901: EDSYQKLNEE YKQIDSLFKE CMVKLEVAEK KIEEMAGEFH EGIESKDKKV ADLEHTVEEL KRDLEEKGDE ISTSVENVRM LEVKLRLSNQ KLRVTEQLLS
1001: EKEESFRKAE EKFQQDQRAL EDRIATLSAI ITANSEAFDE IVSNLKERVN NVTTGIETIS WKVSDDCKNF EDSISNISHE LGVAKDHVRE MNREKEQLKR
1101: DKNHLLEQLQ IKKEQEVALR KSVEKLEAKA SKEESEKMNL TTTVVQLNRT VGELEKKMKE KEDGMLDLGE EKREVIRQLC LWIDYHRSRY DYLKDILSKS
1201: RRGQSAA
0001: MKKHKFRETL KSFFEPHFDH EKGEMLKGTK TEIDEKVNKI LGMVESGDVN EDESNRQVVA DLVKEFYSEY QSLYRQYDDL TGEIRKKVNG KGESSSSSSS
0101: DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
0201: LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
0301: DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
0401: LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
0501: REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
0601: IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
0701: LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
0801: SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
0901: AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1001: SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1101: NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1201: VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1301: QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1401: RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1501: HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
0101: DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
0201: LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
0301: DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
0401: LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
0501: REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
0601: IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
0701: LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
0801: SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
0901: AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1001: SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1101: NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1201: VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1301: QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1401: RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1501: HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
Arabidopsis Description
CIP1COP1-interactive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JZY1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.