Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67508 | Canola | cytosol | 12.99 | 96.73 |
| Bra025461.1-P | Field mustard | nucleus | 62.05 | 78.49 |
| AT5G41790.2 | Thale cress | nucleus | 75.78 | 76.17 |
| Bra027741.1-P | Field mustard | cytosol, mitochondrion, nucleus | 15.93 | 50.5 |
| KRH60017 | Soybean | cytosol | 21.77 | 28.75 |
| VIT_02s0025g01170.t01 | Wine grape | nucleus | 22.4 | 24.39 |
| KRH41293 | Soybean | cytosol | 21.14 | 23.88 |
| Bra028505.1-P | Field mustard | cytosol | 7.28 | 22.7 |
| Bra027742.1-P | Field mustard | cytosol | 8.72 | 20.9 |
Protein Annotations
| EnsemblPlants:Bra028506.1 | EnsemblPlants:Bra028506.1-P | EnsemblPlantsGene:Bra028506 | Gene3D:1.20.5.340 | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011684 | InterPro:NAB | ncoils:Coil | PFAM:PF07765 |
| PFscan:PS51774 | SEG:seg | SUPFAM:SSF57997 | SUPFAM:SSF90257 | UniParc:UPI00025433E9 | UniProt:M4EI91 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT5G41790 (E=0.0) CIP1 | CIP1 (COP1-INTERACTIVE PROTEIN 1); protein binding
Coordinates
chrA02:+:769239..774127
Molecular Weight (calculated)
183078.0 Da
IEP (calculated)
4.590
GRAVY (calculated)
-1.026
Length
1594 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRKHRFRETL KSFFEPHFDH EKDEMLKVTK SEIDEKVKKI LGMVESGNID EDKSKRQVVS ELVNELHQEY QSLYDITGEI RKKVHEKGEN SSSSSSDSDS
0101: DHSSRRETKK NGKVAKDDLK QQIETADHEI ANLKNKLTTS VEEKEAVDSE LEAALVKLKE SEEIISNLKF ETEKLEGEKT TALSDSRELL QKLEVAGRTE
0201: TDLNQKLEDM KKERDQLQTE IDNGIKRFQE AEKIAEDWKT TSDQLKDEAT NFKQQLEAAE QRVSDLTRGM SSAEEENESL SLKVTEISGE IQQAQNTIQE
0301: LTSELGEVKE KYKEKESQHS SLVELHETHE KESSSQVKDL EARVESSEKL IADLNQNLNN AEEEKKLLSQ RVSEISHEIQ EAQNTIKELM SESEQLKESH
0401: SVKEREIFGL RDIHETHQRE PSTRTSELEA QLESSEKRVS DLSTNLKAAE EENKAISSKN VETLDKLEEA QKTINELMAE LGELKDRHKE KESELSSLVE
0501: VHEAHQRDST SRVKELVQVV ESAEQQVADM KQSLNNAEEE KKLLSQRISE ISNEIQEAQN TIQELKSESG QLKESHGEKE RELSGLRDMH ETHQRESTTR
0601: VSELEAQLES SEQRVSDMSA SLKAAEEENK AISSKILETT DKLEQAQNTI QELIAELGEM KERYKEKETE HSSLMELHET QLRESASHVK ELEAQVESSE
0701: KLVADLNQSL NNAEEEKKLL SQKISEISNE IQEAQNTIQE LVSETEQLKE SHDVKEREFS GLRDIHETHQ RESSTRTSEL EAQLKSSEQR VSELSASLNV
0801: AEEESKSMSS KILETTEELK QTQNKVQELM AELAESKDIH IQKESELSSL VEVHEAHKRV SSSRVKELEE LVESAEQRVK DLNQSLNSAE EEKKMLSQRI
0901: SEMSNEIKQA ENTIQELMSE SGQLKESHSE KEKELLSVRD IHETHQRDSS TQLRDLEAQL KSSEQRVSDL SESLKIAEEE NKTMSTKISD TSGELERVQI
1001: MLQELTAESS KLKEHLAEKE AELVHLKEKE IKSQLQIKEL EATIATLELE LQSVRARTVD LETEIVGKTT EIEQLEAQNR EMVARISELG KTMDERGTEL
1101: TALTQKLEDN EKHSSSTIES LTAEIDGLRG GLDSVSLQKE ELEKLMESKG NEASMQIKGL MDEIDGLGQK VASLESQKAE LEIQLERKSE ESSEYMSQIK
1201: NLKDEIISKV KDHDNILEER NGLSEKIKGL EVEIETLRKQ RSELEEELRT KTEEIVQMRD KINEASTETV ALTEQINNLQ DELDSLQVKK SETEAELDRE
1301: KQEKSELSNQ IIDVKRALEE QETAYNTLGE EHKQISQLLK EREEILNKLA EDHKEAQRLL EQTGHEVTSR DSAIAGHEET MESLRNELEM KGEEIETLME
1401: KISNIEVKLR LSNQKLRVTE QVLTEKEEAF RREEARHIEE QALLEKSLKV THETYRGMIK EMAEKVNTTL DGFQSMSGKI TEKQGKYEKT VMEASKLLWT
1501: ATNWMIERNH EMEKMKKGME RKEEEIKKLG EKVREDEKEK ETMKETLMGL GEEKREAIRQ LCIWIDHHRG RCEYLEEILS KTVVARGQRQ SQRA
0101: DHSSRRETKK NGKVAKDDLK QQIETADHEI ANLKNKLTTS VEEKEAVDSE LEAALVKLKE SEEIISNLKF ETEKLEGEKT TALSDSRELL QKLEVAGRTE
0201: TDLNQKLEDM KKERDQLQTE IDNGIKRFQE AEKIAEDWKT TSDQLKDEAT NFKQQLEAAE QRVSDLTRGM SSAEEENESL SLKVTEISGE IQQAQNTIQE
0301: LTSELGEVKE KYKEKESQHS SLVELHETHE KESSSQVKDL EARVESSEKL IADLNQNLNN AEEEKKLLSQ RVSEISHEIQ EAQNTIKELM SESEQLKESH
0401: SVKEREIFGL RDIHETHQRE PSTRTSELEA QLESSEKRVS DLSTNLKAAE EENKAISSKN VETLDKLEEA QKTINELMAE LGELKDRHKE KESELSSLVE
0501: VHEAHQRDST SRVKELVQVV ESAEQQVADM KQSLNNAEEE KKLLSQRISE ISNEIQEAQN TIQELKSESG QLKESHGEKE RELSGLRDMH ETHQRESTTR
0601: VSELEAQLES SEQRVSDMSA SLKAAEEENK AISSKILETT DKLEQAQNTI QELIAELGEM KERYKEKETE HSSLMELHET QLRESASHVK ELEAQVESSE
0701: KLVADLNQSL NNAEEEKKLL SQKISEISNE IQEAQNTIQE LVSETEQLKE SHDVKEREFS GLRDIHETHQ RESSTRTSEL EAQLKSSEQR VSELSASLNV
0801: AEEESKSMSS KILETTEELK QTQNKVQELM AELAESKDIH IQKESELSSL VEVHEAHKRV SSSRVKELEE LVESAEQRVK DLNQSLNSAE EEKKMLSQRI
0901: SEMSNEIKQA ENTIQELMSE SGQLKESHSE KEKELLSVRD IHETHQRDSS TQLRDLEAQL KSSEQRVSDL SESLKIAEEE NKTMSTKISD TSGELERVQI
1001: MLQELTAESS KLKEHLAEKE AELVHLKEKE IKSQLQIKEL EATIATLELE LQSVRARTVD LETEIVGKTT EIEQLEAQNR EMVARISELG KTMDERGTEL
1101: TALTQKLEDN EKHSSSTIES LTAEIDGLRG GLDSVSLQKE ELEKLMESKG NEASMQIKGL MDEIDGLGQK VASLESQKAE LEIQLERKSE ESSEYMSQIK
1201: NLKDEIISKV KDHDNILEER NGLSEKIKGL EVEIETLRKQ RSELEEELRT KTEEIVQMRD KINEASTETV ALTEQINNLQ DELDSLQVKK SETEAELDRE
1301: KQEKSELSNQ IIDVKRALEE QETAYNTLGE EHKQISQLLK EREEILNKLA EDHKEAQRLL EQTGHEVTSR DSAIAGHEET MESLRNELEM KGEEIETLME
1401: KISNIEVKLR LSNQKLRVTE QVLTEKEEAF RREEARHIEE QALLEKSLKV THETYRGMIK EMAEKVNTTL DGFQSMSGKI TEKQGKYEKT VMEASKLLWT
1501: ATNWMIERNH EMEKMKKGME RKEEEIKKLG EKVREDEKEK ETMKETLMGL GEEKREAIRQ LCIWIDHHRG RCEYLEEILS KTVVARGQRQ SQRA
0001: MKKHKFRETL KSFFEPHFDH EKGEMLKGTK TEIDEKVNKI LGMVESGDVN EDESNRQVVA DLVKEFYSEY QSLYRQYDDL TGEIRKKVNG KGESSSSSSS
0101: DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
0201: LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
0301: DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
0401: LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
0501: REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
0601: IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
0701: LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
0801: SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
0901: AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1001: SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1101: NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1201: VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1301: QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1401: RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1501: HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
0101: DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
0201: LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
0301: DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
0401: LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
0501: REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
0601: IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
0701: LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
0801: SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
0901: AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1001: SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1101: NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1201: VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1301: QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1401: RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1501: HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
Arabidopsis Description
CIP1COP1-interactive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JZY1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.