Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028506.1-P | Field mustard | nucleus | 78.49 | 62.05 |
| AT5G41790.2 | Thale cress | nucleus | 68.41 | 54.35 |
| Bra027741.1-P | Field mustard | cytosol, mitochondrion, nucleus | 19.29 | 48.31 |
| KRH60017 | Soybean | cytosol | 27.62 | 28.83 |
| KRH41293 | Soybean | cytosol | 27.06 | 24.17 |
| Bra028505.1-P | Field mustard | cytosol | 9.68 | 23.87 |
| VIT_02s0025g01170.t01 | Wine grape | nucleus | 27.22 | 23.43 |
| Bra027742.1-P | Field mustard | cytosol | 11.35 | 21.5 |
Protein Annotations
| EnsemblPlants:Bra025461.1 | EnsemblPlants:Bra025461.1-P | EnsemblPlantsGene:Bra025461 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR011684 | InterPro:NAB | ncoils:Coil | PANTHER:PTHR43939 | PFscan:PS51774 |
| SEG:seg | SUPFAM:SSF57997 | UniParc:UPI0002545483 | UniProt:M4E9K5 | MapMan:35.1 | : |
Description
AT5G41790 (E=7e-243) CIP1 | CIP1 (COP1-INTERACTIVE PROTEIN 1); protein binding
Coordinates
chrA04:+:8592539..8596321
Molecular Weight (calculated)
144760.0 Da
IEP (calculated)
4.631
GRAVY (calculated)
-1.064
Length
1260 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEKVKKILG MVESGDIDED KSKRQVVSEL VNEFYIAYQT LYRKYDDLTG EIKKKVHGKG ESSSSSSSDS DSDDSSKKKT KRNGKVEKDV VESVTDGQTE
0101: AANLEIADLK KKLTKSVEEK EAVDSELEAA LVKLKESEEI IRNLKLETEK LEGEKTTALS DSRELHQKLD VAGKTETDLS QTLEDVKKER DQLQTEIDNG
0201: IQRFQEAEKI AEDWKTTSGQ LKDEVANFKQ QVEASEKRVL EISGEIQQAQ NTIQELTSEL GEMKEKYKEK ESEHFSLVEL HETHEKESSS QVKELEARVE
0301: SSEKMIGDLN QNLNNAEEEK KLLSQRVSEI SHEIQEAQNT IKELMSESEQ LKESHSVKDR EIFGLRDIHE THQRESSTRT SELEAQLKSS EQRVSELSAS
0401: LNVAEEEKKS MSSKNVETTD ELKQAQNKVQ ELMAELAESK DIHIQKESEL SALVEVHEAH KRDSSSRVKE LETLVESAEQ RVQDLSQSLN NAEEEKKLLS
0501: QRISDMSNEI KQAQNTIQEL MSESGQLKES HTEKDKELLG LRDIHETHQR DSSTQLRDLE AQLKSSEQRV SDLNESLKIA EEENKSMSTK ISDTSGELER
0601: VQITLQELTV ESSKLKEKLA EREAELSNLT EKESKSQLQI KELDATVATL ELELQSVRTR TVDLETEISG KTTEVEKLEA QNREMVARIS ELEKTMDERG
0701: TELSALTQKL EDKEKQASST VESLTAEIDG LRAGLESLSA QKEELEKLME SKGDEASMQI KGLEDEINGL GQKVISLESQ KAELEIQLEK KSEEISEYMS
0801: QITNLREEIT SKVKDHDNIL EERKCLTEKI KGLEVEIETL QTQRSELDEE LRTKTEEILQ MQDKINKASA DTVALTAQIN SLQHELDSLQ VKKSEVESEL
0901: DREKQEKSDL SNQIIDVKKA LIEQEAAYNT LGEEHRQIKE MLKEREEALN KLTEDHKEAQ RLLEETGNEV SSRDSAIAGH EETMESLRNE LEMKGEEIET
1001: LMEKISNIEV KLRLSNQKLR VTEQVLTEKE EAFRREEAKH LEEQAVLEKS LKVTHEAYQG MMKEIAEKAN TTLDGFQSMS GKFTEKQGKY EKTVMEASKL
1101: LWTATNWVIE RNHEKEKMKK EMERKVDEIK KLGDKVREDE KEKERKEEEI KKLGEKVRED EKEKERKEEE IKKLGEKVRE DEKEKEKKEE EIKKLGEKLR
1201: EDEKEKERMK ETLVGLGEEK REAIRQLCVW IDHHRGRCEY LEEVLSKTVV GRGQRPSQRA
0101: AANLEIADLK KKLTKSVEEK EAVDSELEAA LVKLKESEEI IRNLKLETEK LEGEKTTALS DSRELHQKLD VAGKTETDLS QTLEDVKKER DQLQTEIDNG
0201: IQRFQEAEKI AEDWKTTSGQ LKDEVANFKQ QVEASEKRVL EISGEIQQAQ NTIQELTSEL GEMKEKYKEK ESEHFSLVEL HETHEKESSS QVKELEARVE
0301: SSEKMIGDLN QNLNNAEEEK KLLSQRVSEI SHEIQEAQNT IKELMSESEQ LKESHSVKDR EIFGLRDIHE THQRESSTRT SELEAQLKSS EQRVSELSAS
0401: LNVAEEEKKS MSSKNVETTD ELKQAQNKVQ ELMAELAESK DIHIQKESEL SALVEVHEAH KRDSSSRVKE LETLVESAEQ RVQDLSQSLN NAEEEKKLLS
0501: QRISDMSNEI KQAQNTIQEL MSESGQLKES HTEKDKELLG LRDIHETHQR DSSTQLRDLE AQLKSSEQRV SDLNESLKIA EEENKSMSTK ISDTSGELER
0601: VQITLQELTV ESSKLKEKLA EREAELSNLT EKESKSQLQI KELDATVATL ELELQSVRTR TVDLETEISG KTTEVEKLEA QNREMVARIS ELEKTMDERG
0701: TELSALTQKL EDKEKQASST VESLTAEIDG LRAGLESLSA QKEELEKLME SKGDEASMQI KGLEDEINGL GQKVISLESQ KAELEIQLEK KSEEISEYMS
0801: QITNLREEIT SKVKDHDNIL EERKCLTEKI KGLEVEIETL QTQRSELDEE LRTKTEEILQ MQDKINKASA DTVALTAQIN SLQHELDSLQ VKKSEVESEL
0901: DREKQEKSDL SNQIIDVKKA LIEQEAAYNT LGEEHRQIKE MLKEREEALN KLTEDHKEAQ RLLEETGNEV SSRDSAIAGH EETMESLRNE LEMKGEEIET
1001: LMEKISNIEV KLRLSNQKLR VTEQVLTEKE EAFRREEAKH LEEQAVLEKS LKVTHEAYQG MMKEIAEKAN TTLDGFQSMS GKFTEKQGKY EKTVMEASKL
1101: LWTATNWVIE RNHEKEKMKK EMERKVDEIK KLGDKVREDE KEKERKEEEI KKLGEKVRED EKEKERKEEE IKKLGEKVRE DEKEKEKKEE EIKKLGEKLR
1201: EDEKEKERMK ETLVGLGEEK REAIRQLCVW IDHHRGRCEY LEEVLSKTVV GRGQRPSQRA
0001: MKKHKFRETL KSFFEPHFDH EKGEMLKGTK TEIDEKVNKI LGMVESGDVN EDESNRQVVA DLVKEFYSEY QSLYRQYDDL TGEIRKKVNG KGESSSSSSS
0101: DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
0201: LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
0301: DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
0401: LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
0501: REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
0601: IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
0701: LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
0801: SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
0901: AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1001: SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1101: NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1201: VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1301: QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1401: RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1501: HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
0101: DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
0201: LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
0301: DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
0401: LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
0501: REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
0601: IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
0701: LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
0801: SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
0901: AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1001: SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1101: NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1201: VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1301: QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1401: RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1501: HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
Arabidopsis Description
CIP1COP1-interactive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JZY1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.