Factsheet for Bra027741.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra035381.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64330.1	Bra035381.1-P	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47855	Canola	cytosol, mitochondrion, nucleus	99.2	99.2
AT1G64330.1	Thale cress	cytosol, mitochondrion, nucleus	78.13	70.81
Bra025461.1-P	Field mustard	nucleus	48.31	19.29
Bra028505.1-P	Field mustard	cytosol	17.69	17.42
Bra028506.1-P	Field mustard	nucleus	50.5	15.93
KRH60017	Soybean	cytosol	35.79	14.91
Bra027742.1-P	Field mustard	cytosol	17.69	13.38
KRH41293	Soybean	cytosol	35.39	12.62
VIT_02s0025g01170.t01	Wine grape	nucleus	34.0	11.68

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra027741	EnsemblPlants:Bra027741.1	EnsemblPlants:Bra027741.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0016020	InterPro:IPR011684	UniProt:M4EG28
InterPro:NAB	PFAM:PF07765	PFscan:PS51774	PANTHER:PTHR32258	PANTHER:PTHR32258:SF2	UniParc:UPI0002542289
SEG:seg	:	:	:	:	:

Description

AT1G64330 (E=3e-156) | myosin heavy chain-related

Coordinates

chrA09:+:6520105..6521727

Molecular Weight (calculated)

58666.2 Da

IEP (calculated)

4.768

GRAVY (calculated)

-1.099

Length

503 amino acids

Sequence
(BLAST)

001: MRKHSIRESL KSFFEPHLHP DNAELLKGIK TEIDEKVKRI LGIIESGDIE ADESKREVVA ELVKEFYRDY ESLYNQYGDL TGEIRNKVHG KGENESSSSS
101: SDSDSDSDKK SKRNGRADND MKQIEAANLE IADLKRKLET TLEEKEAEHQ ETLKKLKESE DIIGDLRLET DKLATENKEL NQKLEAAGEA ESDLNQKLER
201: EKQEKAALLN QLNDVQNALL EQEAAYNTLS QEHKQVNGLF QEREATIKKL TEDYKQAREM LEEYMSKLEE TERRMQETGK DVASREAEIE ELQETVERLR
301: NQVEMKGEEV ENLMEKMNNI EVKLRLSNQK LRVTEQVLRE REEELKSVEA KHLEKQALLQ EKIVMTHETY GGLVKEMSER LNYRFQDLSE KVEERLGGFE
401: ETVVEATKMV LKAKECVGEM KKEKEEMEKG KEEMEKKLEG QVREGEREKE ELKESLLGLG EEKREAIRQL CVWTEHHRDR CEYLEEVLSK MVVARGQRRS
501: QRA

Best Arabidopsis Sequence Match ( AT1G64330.1 )
(BLAST)

001: MRKLSIRDSL KSFFEPHLHP DNGESLKGTK TEIDEKVKKI LGIVESGDIE EDESKRLVVA ELVKDFYKEY ESLYHQYDDL TGEIRKKVHG KGENDSSSSS
101: SSDSDSDKKS KRNGRGENEI ELLKKQMEDA NLEIADLKMK LATTDEHKEA VESEHQEILK KLKESDEICG NLRVETEKLT SENKELNEKL EVAGETESDL
201: NQKLEDVKKE RDGLEAELAS KAKDHESTLE EVNRLQGQKN ETEAELEREK QEKPALLNQI NDVQKALLEQ EAAYNTLSQE HKQINGLFEE REATIKKLTD
301: DYKQAREMLE EYMSKMEETE RRMQETGKDV ASRESAIVDL EETVESLRNE VERKGDEIES LMEKMSNIEV KLRLSNQKLR VTEQVLTEKE GELKRIEAKH
401: LEEQALLEEK IATTHETYRG LIKEISERVD STILNRFQSL SEKLEEKHKS YEKTVVEATK MLLTAKKCVV EMKKEKDEMA KEKEEVEKKL EGQVREEEKE
501: KEKLKETLLG LGEEKREAIR QLCIWIEHHR DRCEYLEEVL SKMVVARGQR RSQRA

Arabidopsis Description

At1g64330 [Source:UniProtKB/TrEMBL;Acc:Q9C7V7]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.