Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64330.1 | KRH14106 | AT5G35750.1 | 18642946 |
| AT1G64330.1 | KRH74010 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60017 | Soybean | cytosol | 77.82 | 90.97 |
| VIT_02s0025g01170.t01 | Wine grape | nucleus | 39.69 | 38.25 |
| CDX67508 | Canola | cytosol | 5.74 | 37.85 |
| CDX82737 | Canola | nucleus | 5.67 | 37.38 |
| CDX77396 | Canola | nucleus | 9.0 | 36.6 |
| CDY27679 | Canola | cytosol | 11.48 | 36.08 |
| Bra027741.1-P | Field mustard | cytosol, mitochondrion, nucleus | 12.62 | 35.39 |
| CDY64783 | Canola | cytosol, mitochondrion, nucleus | 12.54 | 35.19 |
| CDY47855 | Canola | cytosol, mitochondrion, nucleus | 12.47 | 34.99 |
| CDY49872 | Canola | cytosol | 9.21 | 34.85 |
| AT1G64330.1 | Thale cress | cytosol, mitochondrion, nucleus | 13.61 | 34.59 |
| CDY27680 | Canola | nucleus | 5.81 | 32.54 |
| CDY44989 | Canola | nucleus | 10.56 | 31.97 |
| KRH60016 | Soybean | cytosol | 15.73 | 30.41 |
| KRH41292 | Soybean | cytosol | 12.47 | 28.9 |
| Bra025461.1-P | Field mustard | nucleus | 24.17 | 27.06 |
| CDY68594 | Canola | nucleus | 12.97 | 24.08 |
| CDY49873 | Canola | nucleus | 10.56 | 22.78 |
| AT5G41790.2 | Thale cress | nucleus | 24.17 | 21.5 |
| Bra028506.1-P | Field mustard | nucleus | 23.88 | 21.14 |
| CDX67507 | Canola | nucleus | 19.14 | 20.69 |
Protein Annotations
| EMBL:ACUP02004759 | EnsemblPlants:KRH41293 | EnsemblPlantsGene:GLYMA_08G021400 | EntrezGene:100778046 | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011684 | InterPro:NAB | ncoils:Coil | PANTHER:PTHR13140 |
| PANTHER:PTHR13140:SF694 | PFAM:PF07765 | PFscan:PS51774 | ProteinID:KRH41293 | ProteinID:KRH41293.1 | SEG:seg |
| SUPFAM:SSF57997 | UniParc:UPI00023C64C0 | UniProt:I1KPI6 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr8:+:1729758..1736617
Molecular Weight (calculated)
162630.0 Da
IEP (calculated)
4.679
GRAVY (calculated)
-0.954
Length
1411 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKHRFRDSI KSLFGSHIDP NKEEQLQEAK AEIEDKVKRI LKLIKEDDLE EDGTPVELSK KEPLVELIED FHNQYQSLYA QYDHLTCELR KKINGKQEKG
0101: SSSSSSDSDS DSDYSSKEKD KKNGQLENEF QKKIDGLRQE LEVVHIEVAE SNRKLTITHE EKEDLNSKYL AALSKIQEAD KINMDLKTDA EALGTQRSKL
0201: LVENAELNKQ LETAGKIKAE LSQKLEDLMA EKDSLTIEKE TALQQNEEEK KITDGLRTLV DQLKDEKLAL GKELEAVAGE LSILKQQLEH TEQQMTDISH
0301: NLKVAEEENE SLKVKHSQAS NEVQLAHNRI QDFVAESSQL KEKLDESGRE ISALTQMHEG YQKESSNQIR ELETQLTSLE QELESLQNQK RDMEEQIKSS
0401: TTEARELGEH NSGLQNQISE HEIKSREREE ELSAMMKKLE DNENESSSKM SDLTSQINKL LADIGTLHAQ KNELEEQIIS KSDEASTQFK SITNELNALQ
0501: QEVESLQHQK SDLEVQLVEK IQENSEYVIQ IQTLKEEIDR KILGQERLLE DKENLAMQLR TLELEMNTIK NKNIEAEEQI RAKSHEISHM SQGMLELHEK
0601: IAEIEKISTD RESHFLVLQE KIINTEKAVS AKIQASSEQI KNLGHDLASL QQEKQELEQQ CEKLKLEVDS VQNRKSEVEE QMRAKEHENS GLREENLGLQ
0701: GTITVLEKTI AEKEAELSTL QEKLHEKESE ASGQITSFTV QIDNLKHDLV SVQNEKHELE QQCEKLKMEL DSTNNRKGEI EEQLIAKDRE NTKLRGEILG
0801: LQGTITALEK TLAEKESELS TLQEKLHANE SKASGQITTF TVQIDNLEHD LVSVQNEKHE LEQQCEKLRM ELDSTHNQNG EVEEQMRAKD HENTELREEI
0901: LGLHGTITAL EKTLVEKESE LSTLQEKLHE KESEASGQIT AFTAQIDNLK HDLVSLQNEK HELEQQCEKL KMELDSTHNQ KSEVEEQSRA KGHENTELRE
1001: EILGLQGTIT ALEKTLAEKE SDLSTLQEKL REKESEASRK IIAFTSQIDN LQKDLLSFQK TKEELELHCE KISKEHAQSL VMVENEKNDM SSRTMDLKRS
1101: LEEREESYQK LNIEYKQIDS LFKEWMVKLE VAEKKIEEMA GEFHEGIESK DQKIADLEHT VEELKRDLEE KGDEISTSLE NVRMLEVKLR LSNQKLRVTE
1201: QLLSEKEESF WKTEEKFQQD QRALEDRIAT LSAIITANNE AFDEIVSNLK ECANSVTTGI ETISWKVSDD CKNFKDSVSN VSHELGVAKD HVREMKREKE
1301: QLKRDKRHLL EQLQVKNEQE VTLRKSVEKL EAKASKEESE KMNLTTTVVQ LKKTVGELEK MMKEKEDGML DLGEEKREVI RQLCLWIDYH RSRYDYLKDI
1401: LSKSRRGQRA A
0101: SSSSSSDSDS DSDYSSKEKD KKNGQLENEF QKKIDGLRQE LEVVHIEVAE SNRKLTITHE EKEDLNSKYL AALSKIQEAD KINMDLKTDA EALGTQRSKL
0201: LVENAELNKQ LETAGKIKAE LSQKLEDLMA EKDSLTIEKE TALQQNEEEK KITDGLRTLV DQLKDEKLAL GKELEAVAGE LSILKQQLEH TEQQMTDISH
0301: NLKVAEEENE SLKVKHSQAS NEVQLAHNRI QDFVAESSQL KEKLDESGRE ISALTQMHEG YQKESSNQIR ELETQLTSLE QELESLQNQK RDMEEQIKSS
0401: TTEARELGEH NSGLQNQISE HEIKSREREE ELSAMMKKLE DNENESSSKM SDLTSQINKL LADIGTLHAQ KNELEEQIIS KSDEASTQFK SITNELNALQ
0501: QEVESLQHQK SDLEVQLVEK IQENSEYVIQ IQTLKEEIDR KILGQERLLE DKENLAMQLR TLELEMNTIK NKNIEAEEQI RAKSHEISHM SQGMLELHEK
0601: IAEIEKISTD RESHFLVLQE KIINTEKAVS AKIQASSEQI KNLGHDLASL QQEKQELEQQ CEKLKLEVDS VQNRKSEVEE QMRAKEHENS GLREENLGLQ
0701: GTITVLEKTI AEKEAELSTL QEKLHEKESE ASGQITSFTV QIDNLKHDLV SVQNEKHELE QQCEKLKMEL DSTNNRKGEI EEQLIAKDRE NTKLRGEILG
0801: LQGTITALEK TLAEKESELS TLQEKLHANE SKASGQITTF TVQIDNLEHD LVSVQNEKHE LEQQCEKLRM ELDSTHNQNG EVEEQMRAKD HENTELREEI
0901: LGLHGTITAL EKTLVEKESE LSTLQEKLHE KESEASGQIT AFTAQIDNLK HDLVSLQNEK HELEQQCEKL KMELDSTHNQ KSEVEEQSRA KGHENTELRE
1001: EILGLQGTIT ALEKTLAEKE SDLSTLQEKL REKESEASRK IIAFTSQIDN LQKDLLSFQK TKEELELHCE KISKEHAQSL VMVENEKNDM SSRTMDLKRS
1101: LEEREESYQK LNIEYKQIDS LFKEWMVKLE VAEKKIEEMA GEFHEGIESK DQKIADLEHT VEELKRDLEE KGDEISTSLE NVRMLEVKLR LSNQKLRVTE
1201: QLLSEKEESF WKTEEKFQQD QRALEDRIAT LSAIITANNE AFDEIVSNLK ECANSVTTGI ETISWKVSDD CKNFKDSVSN VSHELGVAKD HVREMKREKE
1301: QLKRDKRHLL EQLQVKNEQE VTLRKSVEKL EAKASKEESE KMNLTTTVVQ LKKTVGELEK MMKEKEDGML DLGEEKREVI RQLCLWIDYH RSRYDYLKDI
1401: LSKSRRGQRA A
0001: MKKHKFRETL KSFFEPHFDH EKGEMLKGTK TEIDEKVNKI LGMVESGDVN EDESNRQVVA DLVKEFYSEY QSLYRQYDDL TGEIRKKVNG KGESSSSSSS
0101: DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
0201: LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
0301: DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
0401: LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
0501: REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
0601: IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
0701: LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
0801: SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
0901: AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1001: SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1101: NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1201: VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1301: QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1401: RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1501: HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
0101: DSDSDHSSKR KVKRNGNGKV EKDVELVTGA LKQQIEAANL EIADLKGKLT TTVEEKEAVD SELELALMKL KESEEISSKL KLETEKLEDE KSIALSDNRE
0201: LHQKLEVAGK TETDLNQKLE DIKKERDELQ TERDNGIKRF QEAEKVAEDW KTTSDQLKDE TSNLKQQLEA SEQRVSELTS GMNSAEEENK SLSLKVSEIS
0301: DVIQQGQTTI QELISELGEM KEKYKEKESE HSSLVELHKT HERESSSQVK ELEAHIESSE KLVADFTQSL NNAEEEKKLL SQKIAELSNE IQEAQNTMQE
0401: LMSESGQLKE SHSVKERELF SLRDIHEIHQ RDSSTRASEL EAQLESSKQQ VSDLSASLKA AEEENKAISS KNVETMNKLE QTQNTIQELM AELGKLKDSH
0501: REKESELSSL VEVHETHQRD SSIHVKELEE QVESSKKLVA ELNQTLNNAE EEKKVLSQKI AELSNEIKEA QNTIQELVSE SGQLKESHSV KDRDLFSLRD
0601: IHETHQRESS TRVSELEAQL ESSEQRISDL TVDLKDAEEE NKAISSKNLE IMDKLEQAQN TIKELMDELG ELKDRHKEKE SELSSLVKSA DQQVADMKQS
0701: LDNAEEEKKM LSQRILDISN EIQEAQKTIQ EHMSESEQLK ESHGVKEREL TGLRDIHETH QRESSTRLSE LETQLKLLEQ RVVDLSASLN AAEEEKKSLS
0801: SMILEITDEL KQAQSKVQEL VTELAESKDT LTQKENELSS FVEVHEAHKR DSSSQVKELE ARVESAEEQV KELNQNLNSS EEEKKILSQQ ISEMSIKIKR
0901: AESTIQELSS ESERLKGSHA EKDNELFSLR DIHETHQREL STQLRGLEAQ LESSEHRVLE LSESLKAAEE ESRTMSTKIS ETSDELERTQ IMVQELTADS
1001: SKLKEQLAEK ESKLFLLTEK DSKSQVQIKE LEATVATLEL ELESVRARII DLETEIASKT TVVEQLEAQN REMVARISEL EKTMEERGTE LSALTQKLED
1101: NDKQSSSSIE TLTAEIDGLR AELDSMSVQK EEVEKQMVCK SEEASVKIKR LDDEVNGLRQ QVASLDSQRA ELEIQLEKKS EEISEYLSQI TNLKEEIINK
1201: VKVHESILEE INGLSEKIKG RELELETLGK QRSELDEELR TKKEENVQMH DKINVASSEI MALTELINNL KNELDSLQVQ KSETEAELER EKQEKSELSN
1301: QITDVQKALV EQEAAYNTLE EEHKQINELF KETEATLNKV TVDYKEAQRL LEERGKEVTS RDSTIGVHEE TMESLRNELE MKGDEIETLM EKISNIEVKL
1401: RLSNQKLRVT EQVLTEKEEA FRKEEAKHLE EQALLEKNLT MTHETYRGMI KEIADKVNIT VDGFQSMSEK LTEKQGRYEK TVMEASKILW TATNWVIERN
1501: HEKEKMNKEI EKKDEEIKKL GGKVREDEKE KEMMKETLMG LGEEKREAIR QLCVWIDHHR SRCEYLEEVL SKTVVARGQR RVSQRT
Arabidopsis Description
CIP1COP1-interactive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JZY1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.