Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012802 | Potato | nucleus | 93.18 | 91.38 |
| Solyc08g008260.2.1 | Tomato | nucleus | 54.2 | 45.79 |
| AT5G41780.1 | Thale cress | cytosol | 20.6 | 29.24 |
| KRH41292 | Soybean | cytosol | 23.23 | 29.06 |
| AT1G64320.1 | Thale cress | cytosol | 23.75 | 29.05 |
| Bra028505.1-P | Field mustard | cytosol | 19.03 | 28.38 |
| CDX67506 | Canola | cytosol | 19.03 | 28.27 |
| KRH60016 | Soybean | cytosol | 26.51 | 27.67 |
| CDY71570 | Canola | endoplasmic reticulum | 18.5 | 26.6 |
| CDY64785 | Canola | cytosol | 17.32 | 26.56 |
| Bra027742.1-P | Field mustard | cytosol | 21.92 | 25.11 |
| Solyc08g082010.2.1 | Tomato | nucleus | 30.97 | 17.6 |
Protein Annotations
| EnsemblPlants:Solyc12g056060.1.1 | EnsemblPlantsGene:Solyc12g056060.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011684 | InterPro:NAB | ncoils:Coil | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF664 | PFAM:PF07765 |
| PFscan:PS51774 | SEG:seg | UniParc:UPI0002769D31 | UniProt:K4DFT7 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr12:-:62020742..62023387
Molecular Weight (calculated)
89161.7 Da
IEP (calculated)
6.169
GRAVY (calculated)
-0.980
Length
762 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKQRLKGSL KAFQIHMDPE KEAQMKGIKI EIENKVKRIV KLSKSMNKGS REGNTRRRAE LIQLVDDLHK QYQSLYAKYE NLKGEVKYNL CAKAGDDAAS
101: SSSSVSDSEA YHSPWQFAGE GTSYFSNTTN HENASLDLDS LPDSPTSSVQ EPESRDFFKD LNNQGTENSM TEKLMNESAW LKEKLTEKEE DILSLTKKYE
201: VHESERLAEI KTLEDQIEMM KIELETSCVQ KKELGEKFTC KSNEFKQMEA AFQEKSDQFS SLLTRFEENQ TNSKSKIDDL MAQAKSLQQE LDSLHTERNE
301: QLKSFNNQKR EMELSLEKKC HEGTVEVKDL NEKIKFLQQE LEATSHRKSE VEMSLKEKNE ELSECHLQIE NLKEKLTRAS SIEKEILKAK EGLQLEVDSL
401: CSQKSDLEKQ IRDINQEAHR SQLEKEELTD KMKELETILL EKKHEMSTLQ KKHEAYTNEN SAMATQINTL QQQLRTEETE KVLLLSQLEK DKHNSYNSLT
501: HMEKKNIDLT TKITDQAKSI RENEDIIKKL NEEHRQMKIR LEDSKSNLQS AEKKIEEMTE DLRKKFEDGL RILSRRIRVA EQMHLENKEW YQKTRDSYEK
601: ENNDLKEKNS RLQVGVRGIK DMTLTANDTL ASLDTIALKF EECTGHFFNR MSKVSCELKF VKDWVMRKNK AIVHVQDDLD CLLEQLDIKE AEILVYREKV
701: WKSDNKVREL EKMIKEKDDS MLALKEEKRE AIRQLCIWID YHRSRSVYYQ KSLSVFGSRK NL
101: SSSSVSDSEA YHSPWQFAGE GTSYFSNTTN HENASLDLDS LPDSPTSSVQ EPESRDFFKD LNNQGTENSM TEKLMNESAW LKEKLTEKEE DILSLTKKYE
201: VHESERLAEI KTLEDQIEMM KIELETSCVQ KKELGEKFTC KSNEFKQMEA AFQEKSDQFS SLLTRFEENQ TNSKSKIDDL MAQAKSLQQE LDSLHTERNE
301: QLKSFNNQKR EMELSLEKKC HEGTVEVKDL NEKIKFLQQE LEATSHRKSE VEMSLKEKNE ELSECHLQIE NLKEKLTRAS SIEKEILKAK EGLQLEVDSL
401: CSQKSDLEKQ IRDINQEAHR SQLEKEELTD KMKELETILL EKKHEMSTLQ KKHEAYTNEN SAMATQINTL QQQLRTEETE KVLLLSQLEK DKHNSYNSLT
501: HMEKKNIDLT TKITDQAKSI RENEDIIKKL NEEHRQMKIR LEDSKSNLQS AEKKIEEMTE DLRKKFEDGL RILSRRIRVA EQMHLENKEW YQKTRDSYEK
601: ENNDLKEKNS RLQVGVRGIK DMTLTANDTL ASLDTIALKF EECTGHFFNR MSKVSCELKF VKDWVMRKNK AIVHVQDDLD CLLEQLDIKE AEILVYREKV
701: WKSDNKVREL EKMIKEKDDS MLALKEEKRE AIRQLCIWID YHRSRSVYYQ KSLSVFGSRK NL
001: MERAKTEVEK KVSRLLKFIQ NKNRIPRDSK RELLGIVNDL QEQCQSLYSL CDNFQQDLDP KSGGRRKGIS RVASSSSDLE YYSSEEIDNV VEEGNDICEL
101: QSKIEALRNE AEEKQRELTL RVKELERELG NAKAECDRKG NLEEEIAMKA TESKQLGEKN KGLRSQISGL ESVLKEKGDE ISTLVNKFGN SELGLTSRIE
201: DLKCQLKNLE QEIGFLRARN AGLAGNLEVT KVEEKERVKG LMDQVNGMKH ELESLRSQKD ESEAKLEKKV EEVTETKMQL KSLKEETEEE RNRLSEEIDQ
301: LKGENQMLHR RISELDSLHM EMKTKSAHEM EDASKKLDTE VSDQKKLVKE QDDIIRRLSA KIKDQQRLLK EQKDTIDKFA EDQKQSKRWS FGSSRDLKLN
401: PNALERKMEE LAEDFRMKIE DHIRILYRRI HVAEQIHLES KNEYIKTRDM LKENKENRES LMFFETQFNK MKDALEKGYT GSETAMKKLE EAEEVTNRVA
501: RIGKEMESAK LWVSEKKSEV ETLTAKLECS EAQETLLKEK LSKLEKKLAE EGTEKLKLAK VLSKFETRIK ELEVKVKGRE VELLSLGEEK REAIRQLCIL
601: VDYHQDRYNQ LKKSILKVDD LKT
101: QSKIEALRNE AEEKQRELTL RVKELERELG NAKAECDRKG NLEEEIAMKA TESKQLGEKN KGLRSQISGL ESVLKEKGDE ISTLVNKFGN SELGLTSRIE
201: DLKCQLKNLE QEIGFLRARN AGLAGNLEVT KVEEKERVKG LMDQVNGMKH ELESLRSQKD ESEAKLEKKV EEVTETKMQL KSLKEETEEE RNRLSEEIDQ
301: LKGENQMLHR RISELDSLHM EMKTKSAHEM EDASKKLDTE VSDQKKLVKE QDDIIRRLSA KIKDQQRLLK EQKDTIDKFA EDQKQSKRWS FGSSRDLKLN
401: PNALERKMEE LAEDFRMKIE DHIRILYRRI HVAEQIHLES KNEYIKTRDM LKENKENRES LMFFETQFNK MKDALEKGYT GSETAMKKLE EAEEVTNRVA
501: RIGKEMESAK LWVSEKKSEV ETLTAKLECS EAQETLLKEK LSKLEKKLAE EGTEKLKLAK VLSKFETRIK ELEVKVKGRE VELLSLGEEK REAIRQLCIL
601: VDYHQDRYNQ LKKSILKVDD LKT
Arabidopsis Description
myosin heavy chain-related [Source:TAIR;Acc:AT1G64320]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.