Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT4G15735.1 | Thale cress | extracellular | 62.22 | 52.34 |
CDY54353 | Canola | extracellular | 51.11 | 46.46 |
AT4G15733.1 | Thale cress | extracellular | 43.33 | 45.35 |
Protein Annotations
MapMan:35.1 | EntrezGene:3768317 | EMBL:AC007018 | ProteinID:AEC05895.1 | ArrayExpress:AT2G05117 | EnsemblPlantsGene:AT2G05117 |
RefSeq:AT2G05117 | TAIR:AT2G05117 | RefSeq:AT2G05117-TAIR-G | EnsemblPlants:AT2G05117.1 | TAIR:AT2G05117.1 | Unigene:At.63217 |
GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0031640 | GO:GO:0050832 |
RefSeq:NP_001031324.1 | UniProt:P82628 | PFAM:PF06876 | PANTHER:PTHR34450 | InterPro:SCRL | Symbol:SCRL9 |
SignalP:SignalP-noTM | UniParc:UPI00000ABACF | : | : | : | : |
Description
SCRL9Putative defensin-like protein 243 [Source:UniProtKB/Swiss-Prot;Acc:P82628]
Coordinates
chr2:-:1838592..1839014
Molecular Weight (calculated)
10273.3 Da
IEP (calculated)
6.476
GRAVY (calculated)
-0.182
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MKVEVIFLAS CVLFSLIHAH LSHEEPMKEP EYCRWTNAFN GTCSDRGNPQ TMCFFDFLDA HTARVMPKNC ACNDLPGNKR YCECSFVCNS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.