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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • endoplasmic reticulum 6
  • golgi 5
  • extracellular 7
  • vacuole 4
  • plasma membrane 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G15735.1 Thale cress extracellular 62.22 52.34
CDY54353 Canola extracellular 51.11 46.46
AT4G15733.1 Thale cress extracellular 43.33 45.35
Protein Annotations
MapMan:35.1EntrezGene:3768317EMBL:AC007018ProteinID:AEC05895.1ArrayExpress:AT2G05117EnsemblPlantsGene:AT2G05117
RefSeq:AT2G05117TAIR:AT2G05117RefSeq:AT2G05117-TAIR-GEnsemblPlants:AT2G05117.1TAIR:AT2G05117.1Unigene:At.63217
GO:GO:0005575GO:GO:0005576GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009605GO:GO:0009607GO:GO:0009987GO:GO:0031640GO:GO:0050832
RefSeq:NP_001031324.1UniProt:P82628PFAM:PF06876PANTHER:PTHR34450InterPro:SCRLSymbol:SCRL9
SignalP:SignalP-noTMUniParc:UPI00000ABACF::::
Description
SCRL9Putative defensin-like protein 243 [Source:UniProtKB/Swiss-Prot;Acc:P82628]
Coordinates
chr2:-:1838592..1839014
Molecular Weight (calculated)
10273.3 Da
IEP (calculated)
6.476
GRAVY (calculated)
-0.182
Length
90 amino acids
Sequence
(BLAST)
1: MKVEVIFLAS CVLFSLIHAH LSHEEPMKEP EYCRWTNAFN GTCSDRGNPQ TMCFFDFLDA HTARVMPKNC ACNDLPGNKR YCECSFVCNS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.