CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G15735.1	Thale cress	extracellular	63.64	58.88
AT4G15733.1	Thale cress	extracellular	50.51	58.14
AT2G05117.1	Thale cress	extracellular	46.46	51.11

Protein Annotations

EnsemblPlants:CDY54353	EnsemblPlantsGene:GSBRNA2T00013930001	GO:A0A078IYX7	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	InterPro:SCRL	PANTHER:PTHR34450	PFAM:PF06876	ProteinID:CDY54353	ProteinID:CDY54353.1
SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EB5650	UniProt:A0A078IYX7	MapMan:35.1	:

Description

BnaC08g47710DBnaC08g47710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYX7]

Coordinates

chrLK033308:+:63637..64058

Molecular Weight (calculated)

10840.3 Da

IEP (calculated)

7.863

GRAVY (calculated)

0.016

Length

99 amino acids

Sequence
(BLAST)

1: MKFAGIAAVL LVSFALFSLL DADSQEEPIL APIPEPVYCR SKQMFKGSCK DRGSPSATCF LDFLGARSAS EMPKNCHCTP KPKNMRLCEC QVVCKDCCN

Best Arabidopsis Sequence Match ( AT4G15735.1 )
(BLAST)

001: MKVVAIFLAS CVLFSLIPTH LSHEEPKVAP TEELMFAPSN QPRYCRSRQV FDGSCTDRGT PRTTCFLDFL GARSASEMPK NCDCTPQPNN KRLCECSVIC
101: TDCCVKN

Arabidopsis Description

SCRL10Defensin-like protein 242 [Source:UniProtKB/Swiss-Prot;Acc:P82629]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.