Factsheet for AT3G06450.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
golgi 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, golgi, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08050	Canola	plasma membrane	92.62	91.99
CDX74103	Canola	plasma membrane	92.49	91.73
Bra001198.1-P	Field mustard	plasma membrane	91.8	91.55
AT3G62270.1	Thale cress	plasma membrane	66.94	69.7
AT2G47160.2	Thale cress	plasma membrane	67.49	67.76
AT1G15460.1	Thale cress	cytosol, golgi, peroxisome	50.0	53.59
AT1G74810.4	Thale cress	plasma membrane	49.59	53.15
AT4G32510.2	Thale cress	plasma membrane	46.99	50.96
AT5G25430.1	Thale cress	golgi, peroxisome, plasma membrane	46.31	50.52

Protein Annotations

MapMan:24.2.3.6	EntrezGene:819821	UniProt:A0A178V9G0	ProteinID:AAF08571.1	ProteinID:AEE74395.1	ProteinID:AEE74396.1
ProteinID:ANM64581.1	ProteinID:ANM64582.1	ArrayExpress:AT3G06450	EnsemblPlantsGene:AT3G06450	RefSeq:AT3G06450	TAIR:AT3G06450
RefSeq:AT3G06450-TAIR-G	EnsemblPlants:AT3G06450.1	TAIR:AT3G06450.1	EMBL:AY058850	Unigene:At.18604	EMBL:BT000635
GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006820	GO:GO:0008150	GO:GO:0008509
GO:GO:0009987	GO:GO:0015301	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725
GO:GO:0051453	GO:GO:0098656	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	RefSeq:NP_001118590.1	RefSeq:NP_001326597.1
RefSeq:NP_001326598.1	RefSeq:NP_187296.2	ProteinID:OAP02927.1	PFAM:PF00955	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR11453
PANTHER:PTHR11453:SF51	UniProt:Q93Z13	TMHMM:TMhelix	UniParc:UPI00000AC398	SEG:seg	:

Description

BOR3HCO3-transporter family [Source:UniProtKB/TrEMBL;Acc:A0A178V9G0]

Coordinates

chr3:-:1975915..1980110

Molecular Weight (calculated)

80772.7 Da

IEP (calculated)

8.827

GRAVY (calculated)

0.220

Length

732 amino acids

Sequence
(BLAST)

001: MDEAESFVPF QGIKKDVKGR LNCYKQDWIS GLRAGFRILA PTTYIFFASA IPVITFGEQL ERDTDGKITA VQTLVSTALC GVIHSIIGGQ PLLILGVAEP
101: TVIMYTFMFN FAKSRTDLGS NLFLAWTGWV CLWTGLLLFL LAVLGACTFI NRFTRLAGEL FGILIAMLFM QEAIRGIVDE FGVPGRTNPR SAEFQPAWVF
201: ANGMFGLVLS SGLLYTGLKS RKARSWRFGA EWLRGFIADY GVPVMVVVWT CISYIPWKSV PQGIPRRLVS PNPWSPGAYQ NWTVIKEMVD VPVLYILLAV
301: VPASMIAVLY YFDHSVASQL AQQEDFNLRK PPAYHYDLFL LGFLTILCGL IGIPPSNGVI PQSPMHTKSL ATLNHQLLRN KLVAAARKCI RNNATIGEVY
401: GSMEEAYQQM QSPLIHQEPS RIQGLKQSHI QKASNADALV DETVFDIETE VENILPVEVK EQRVSNFLQA MMVAGCVAAM PLIKRIPSSV LWGYFAYMAI
501: ESLPGNQFWE RIVLLFTAPS RRFKVLEDNH AVFIETVPFK TMAMFTLFQT AYLLVCFGIT WVPVAGVLFP LMIMFLVPVR QYVLPNFFKG AHLQDLDAAE
601: YEEAPAILSF NLKPEGEVSR ATSFADSGEV MDGMFTRSRG EIRKVSSLKL GGGGSGSTVG SPAGGGVELM RRVVSFQNPR VSEKVYIRSL SDFRGGGEIS
701: PRSSAGRAPF SPRSATGGGG GEQRLSNLGK SV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.