Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001198.1-P | Field mustard | plasma membrane | 98.51 | 99.05 |
| CDY08050 | Canola | plasma membrane | 98.64 | 98.78 |
| AT3G06450.1 | Thale cress | plasma membrane | 91.73 | 92.49 |
| CDX93980 | Canola | plasma membrane | 67.48 | 70.54 |
| CDX80082 | Canola | plasma membrane | 67.07 | 70.31 |
| CDX83341 | Canola | plasma membrane | 67.07 | 70.31 |
| CDY50920 | Canola | plasma membrane | 66.94 | 70.17 |
| CDY37790 | Canola | plasma membrane | 66.8 | 70.03 |
| CDY51414 | Canola | plasma membrane | 66.53 | 69.94 |
| CDY27507 | Canola | plasma membrane | 66.4 | 69.8 |
| CDY69873 | Canola | golgi, plasma membrane | 43.5 | 65.51 |
| CDY39649 | Canola | plasma membrane | 50.81 | 55.56 |
| CDY37274 | Canola | plasma membrane | 50.14 | 54.17 |
| CDY68117 | Canola | plasma membrane | 50.0 | 54.03 |
| CDY13492 | Canola | plasma membrane | 47.02 | 52.58 |
| CDX72362 | Canola | plasma membrane | 46.88 | 52.34 |
| CDX80510 | Canola | plasma membrane | 47.02 | 51.71 |
| CDX88179 | Canola | plasma membrane | 47.02 | 51.64 |
| CDX68852 | Canola | plasma membrane | 46.75 | 51.49 |
| CDY46028 | Canola | cytosol, golgi, plasma membrane | 35.37 | 48.97 |
| CDY37788 | Canola | cytosol | 7.86 | 47.54 |
| CDY37789 | Canola | endoplasmic reticulum, golgi | 14.36 | 47.53 |
| CDX75250 | Canola | plastid | 46.75 | 28.4 |
| CDY36563 | Canola | plasma membrane | 50.81 | 23.87 |
| CDX68853 | Canola | plastid | 0.14 | 0.19 |
Protein Annotations
| MapMan:24.2.3.6 | GO:A0A078CGM4 | EnsemblPlants:CDX74103 | ProteinID:CDX74103 | ProteinID:CDX74103.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005452 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006820 | GO:GO:0008150 |
| GO:GO:0015698 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00111858001 | InterPro:HCO3_transpt_C | InterPro:HCO3_transpt_euk |
| PFAM:PF00955 | PANTHER:PTHR11453 | PANTHER:PTHR11453:SF51 | TMHMM:TMhelix | UniParc:UPI0004EEA0B8 | SEG:seg |
Description
BnaA03g29440D
Coordinates
chrLK031800:+:1332608..1336491
Molecular Weight (calculated)
81246.5 Da
IEP (calculated)
9.285
GRAVY (calculated)
0.234
Length
738 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAESFVPF QGIKNDIKGR LRCYKHDWIS GFRAGFRILA PTTYIFFASA IPVITFGEQL ERDTDGKITA VQTLVSTALC GVIHSIIGGQ PLLILGVAEP
101: TVIMYTFMFN FAKNRQDLGS NLFLAWTGWV CLWTGLLLFL LAILGACSFI NRFTRLAGEL FGILIAMLFM QEAIRGVVDE FGVPGRTNPT SAQFQPAWVF
201: ANGMFGLVLS FGLLYTALKS RKARSWRFGA EWLRGFIADY GVPVMVVVWT CVSYIPWKSV PQGIPRRLVS PNPWSPGAYQ NWTVIKEMLD VPVVYIILAL
301: VPASMIAVLY YFDHSVASQL AQQEDFNLRK PPSFHYDLLL LGFLTILCGL LGIPPSNGVI PQSPMHTKSL ATLKHQLLRN KLVAAARKCI RNKATLGEVY
401: GSMEEAYQQM QSPLIHQGPS RIQGLKQSQM QKGLGLANAD TLVDEAVFDV ETEVENVLPV EVKEQRLSNF LQAMLVAGCV AAMPLIKRIP SSVLWGYFAY
501: MAIESLPGNQ FWERIVLLFT APSRRFKVLE DNHAVFVETV PFKTMAMFTL FQTGYLLVCF GITWVPVAGV LFPLMIMFLV PVRQYVLPNF FKGAHLQDLD
601: AAEYEEAPAL LSFNLKPEGE VSRATSFADS GEVMDGMFTR SRGEIRRVNS IKLAGSVGGG STGGSPAGGV ELMRRVVSFQ NPRVSEKVYI RSLSDYRGGG
701: ESSPRSPAGR APLSPRFAAA GGGGGGGEQR LSNLGKSV
101: TVIMYTFMFN FAKNRQDLGS NLFLAWTGWV CLWTGLLLFL LAILGACSFI NRFTRLAGEL FGILIAMLFM QEAIRGVVDE FGVPGRTNPT SAQFQPAWVF
201: ANGMFGLVLS FGLLYTALKS RKARSWRFGA EWLRGFIADY GVPVMVVVWT CVSYIPWKSV PQGIPRRLVS PNPWSPGAYQ NWTVIKEMLD VPVVYIILAL
301: VPASMIAVLY YFDHSVASQL AQQEDFNLRK PPSFHYDLLL LGFLTILCGL LGIPPSNGVI PQSPMHTKSL ATLKHQLLRN KLVAAARKCI RNKATLGEVY
401: GSMEEAYQQM QSPLIHQGPS RIQGLKQSQM QKGLGLANAD TLVDEAVFDV ETEVENVLPV EVKEQRLSNF LQAMLVAGCV AAMPLIKRIP SSVLWGYFAY
501: MAIESLPGNQ FWERIVLLFT APSRRFKVLE DNHAVFVETV PFKTMAMFTL FQTGYLLVCF GITWVPVAGV LFPLMIMFLV PVRQYVLPNF FKGAHLQDLD
601: AAEYEEAPAL LSFNLKPEGE VSRATSFADS GEVMDGMFTR SRGEIRRVNS IKLAGSVGGG STGGSPAGGV ELMRRVVSFQ NPRVSEKVYI RSLSDYRGGG
701: ESSPRSPAGR APLSPRFAAA GGGGGGGEQR LSNLGKSV
001: MDEAESFVPF QGIKKDVKGR LNCYKQDWIS GLRAGFRILA PTTYIFFASA IPVITFGEQL ERDTDGKITA VQTLVSTALC GVIHSIIGGQ PLLILGVAEP
101: TVIMYTFMFN FAKSRTDLGS NLFLAWTGWV CLWTGLLLFL LAVLGACTFI NRFTRLAGEL FGILIAMLFM QEAIRGIVDE FGVPGRTNPR SAEFQPAWVF
201: ANGMFGLVLS SGLLYTGLKS RKARSWRFGA EWLRGFIADY GVPVMVVVWT CISYIPWKSV PQGIPRRLVS PNPWSPGAYQ NWTVIKEMVD VPVLYILLAV
301: VPASMIAVLY YFDHSVASQL AQQEDFNLRK PPAYHYDLFL LGFLTILCGL IGIPPSNGVI PQSPMHTKSL ATLNHQLLRN KLVAAARKCI RNNATIGEVY
401: GSMEEAYQQM QSPLIHQEPS RIQGLKQSHI QKASNADALV DETVFDIETE VENILPVEVK EQRVSNFLQA MMVAGCVAAM PLIKRIPSSV LWGYFAYMAI
501: ESLPGNQFWE RIVLLFTAPS RRFKVLEDNH AVFIETVPFK TMAMFTLFQT AYLLVCFGIT WVPVAGVLFP LMIMFLVPVR QYVLPNFFKG AHLQDLDAAE
601: YEEAPAILSF NLKPEGEVSR ATSFADSGEV MDGMFTRSRG EIRKVSSLKL GGGGSGSTVG SPAGGGVELM RRVVSFQNPR VSEKVYIRSL SDFRGGGEIS
701: PRSSAGRAPF SPRSATGGGG GEQRLSNLGK SV
101: TVIMYTFMFN FAKSRTDLGS NLFLAWTGWV CLWTGLLLFL LAVLGACTFI NRFTRLAGEL FGILIAMLFM QEAIRGIVDE FGVPGRTNPR SAEFQPAWVF
201: ANGMFGLVLS SGLLYTGLKS RKARSWRFGA EWLRGFIADY GVPVMVVVWT CISYIPWKSV PQGIPRRLVS PNPWSPGAYQ NWTVIKEMVD VPVLYILLAV
301: VPASMIAVLY YFDHSVASQL AQQEDFNLRK PPAYHYDLFL LGFLTILCGL IGIPPSNGVI PQSPMHTKSL ATLNHQLLRN KLVAAARKCI RNNATIGEVY
401: GSMEEAYQQM QSPLIHQEPS RIQGLKQSHI QKASNADALV DETVFDIETE VENILPVEVK EQRVSNFLQA MMVAGCVAAM PLIKRIPSSV LWGYFAYMAI
501: ESLPGNQFWE RIVLLFTAPS RRFKVLEDNH AVFIETVPFK TMAMFTLFQT AYLLVCFGIT WVPVAGVLFP LMIMFLVPVR QYVLPNFFKG AHLQDLDAAE
601: YEEAPAILSF NLKPEGEVSR ATSFADSGEV MDGMFTRSRG EIRKVSSLKL GGGGSGSTVG SPAGGGVELM RRVVSFQNPR VSEKVYIRSL SDFRGGGEIS
701: PRSSAGRAPF SPRSATGGGG GEQRLSNLGK SV
Arabidopsis Description
BOR3HCO3-transporter family [Source:UniProtKB/TrEMBL;Acc:A0A178V9G0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.