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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
BaCelLo:cytosol
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008167.1-P Field mustard plasma membrane 99.85 99.85
CDY37274 Canola plasma membrane 99.12 99.12
CDY46028 Canola cytosol, golgi, plasma membrane 74.82 95.87
CDY39649 Canola plasma membrane 84.77 85.78
AT1G74810.4 Thale cress plasma membrane 84.19 84.19
GSMUA_Achr2P19680_001 Banana plasma membrane 63.98 65.71
HORVU3Hr1G023560.1 Barley plasma membrane 63.84 65.47
HORVU3Hr1G023480.4 Barley plasma membrane 63.84 65.47
TraesCS3A01G126300.1 Wheat golgi 63.25 64.86
CDY13492 Canola plasma membrane 62.66 64.85
CDX72362 Canola plasma membrane 62.52 64.6
Zm00001d039647_P001 Maize plasma membrane 62.81 64.03
TraesCS4D01G326900.1 Wheat plasma membrane 62.37 63.96
CDX68852 Canola plasma membrane 62.66 63.88
TraesCS5A01G501500.1 Wheat plasma membrane 62.37 63.87
HORVU4Hr1G081330.4 Barley plasma membrane 62.81 63.74
TraesCS4B01G330000.1 Wheat plasma membrane 62.23 63.72
TraesCS3B01G145500.3 Wheat plasma membrane 62.96 63.7
Os01t0175700-01 Rice plasma membrane 62.66 63.69
GSMUA_Achr5P06140_001 Banana plasma membrane 61.93 63.42
Os01t0175600-01 Rice plasma membrane 62.37 63.39
OQU86222 Sorghum plasma membrane 61.49 63.35
CDX88179 Canola plasma membrane 62.08 63.1
Os05t0176800-01 Rice plasma membrane 62.23 62.78
CDX80510 Canola plasma membrane 61.64 62.74
TraesCS7B01G475400.1 Wheat plasma membrane 60.18 62.27
HORVU0Hr1G032340.2 Barley plasma membrane 44.95 60.55
KXG21448 Sorghum plasma membrane 60.18 59.83
TraesCS3D01G127300.4 Wheat plasma membrane 61.93 59.66
Zm00001d009789_P006 Maize plasma membrane 59.3 58.02
Zm00001d042982_P001 Maize plasma membrane 53.44 55.22
TraesCS1B01G137300.2 Wheat mitochondrion, plasma membrane 60.47 54.85
CDY37790 Canola plasma membrane 56.37 54.69
CDY50920 Canola plasma membrane 56.22 54.55
CDX80082 Canola plasma membrane 56.22 54.55
CDX83341 Canola plasma membrane 56.08 54.4
CDY51414 Canola plasma membrane 55.78 54.27
CDY27507 Canola plasma membrane 55.78 54.27
TraesCS1D01G118600.2 Wheat plasma membrane 60.76 54.11
TraesCS1A01G117500.3 Wheat plasma membrane 60.76 53.97
CDX93980 Canola plasma membrane 55.78 53.97
HORVU1Hr1G025890.7 Barley plastid 61.05 53.19
CDX74103 Canola plasma membrane 54.03 50.0
CDY08050 Canola plasma membrane 53.73 49.8
CDY69873 Canola golgi, plasma membrane 34.41 47.96
CDY37788 Canola cytosol 6.73 37.7
CDY36563 Canola plasma membrane 84.63 36.79
Zm00001d048447_P002 Maize cytosol 46.71 36.75
CDX75250 Canola plastid 62.52 35.14
CDY37789 Canola endoplasmic reticulum, golgi 10.83 33.18
CDX68853 Canola plastid 0.44 0.57
Protein Annotations
MapMan:24.2.3.6GO:A0A078JRQ6UniProt:A0A078JRQ6EnsemblPlants:CDY68117ProteinID:CDY68117ProteinID:CDY68117.1
GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575GO:GO:0006810GO:GO:0006820
GO:GO:0008150GO:GO:0015698GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00069284001InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_eukPFAM:PF00955PANTHER:PTHR11453PANTHER:PTHR11453:SF48TMHMM:TMhelixUniParc:UPI0004EDACC8
SEG:seg:::::
Description
BnaA02g35930DBnaA02g35930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRQ6]
Coordinates
chrLK036874:-:2861..6978
Molecular Weight (calculated)
76462.6 Da
IEP (calculated)
7.398
GRAVY (calculated)
0.162
Length
683 amino acids
Sequence
(BLAST)
001: MEEERVGSSK RPFRGIIADL KGRALYYKHD WVAGLRSGFG ILAPTTYVFF ASALPVIAFG EQLSRDTDGV LSPVETLTST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYHFAKGRPE LGKELFLAWA AWVCVWTALL LVVIAIFNVA DIINRFTRIA GELFGMLIAV LFIQQTIKGM LSEFKMPDHE DSTLEKYQFQ
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRNFI ADYGVPLMVV VWTALSFSTP STLPSGVPRR LSSPLPWDSA SLGHWTVIKD MGKVPPPYIF
301: AGFIPALMIA GLYFFDHSVV AQLAQQKEFN LKNPSAYHYD VLLLGFMVLV CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVMTAK ESMRKRASSS
401: QVYENMQEVF IEMDKSPLVQ TNSTHILELQ DLKDAVMKKT DEEGDSSEEG GFDPEKHLEA FLPVRVNEQR VSNLLQSLLV AGAVLAIPAI KLIPTSLLWG
501: YFAYMAIDSL PGNQFFERTV LLFVPPSRRF KVLEGAHASF VEKVPYKSMA AFTMLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYL LPKLFKPAHL
601: RELDASEYEE IPGTPRNPLE LSFRSTGSMK DVLECDAEIL DELTTSRGEL RVRPASLSPD KGHQIYPNEI VEAGDGDMST PRE
Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)
001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.