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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • peroxisome 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
TargetP:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G118600.2 Wheat plasma membrane 83.04 84.88
TraesCS1B01G137300.2 Wheat mitochondrion, plasma membrane 81.38 84.73
TraesCS1A01G117500.3 Wheat plasma membrane 81.89 83.48
Os05t0176800-01 Rice plasma membrane 71.43 82.72
KXG21448 Sorghum plasma membrane 70.41 80.35
Zm00001d009789_P006 Maize plasma membrane 68.49 76.93
Zm00001d042982_P001 Maize plasma membrane 63.01 74.74
HORVU3Hr1G023560.1 Barley plasma membrane 59.57 70.12
HORVU3Hr1G023480.4 Barley plasma membrane 59.57 70.12
HORVU4Hr1G081330.4 Barley plasma membrane 58.93 68.65
GSMUA_Achr2P19680_001 Banana plasma membrane 57.53 67.82
HORVU0Hr1G032340.2 Barley plasma membrane 42.86 66.27
GSMUA_Achr5P06140_001 Banana plasma membrane 54.59 64.17
PGSC0003DMT400074816 Potato plasma membrane 53.57 64.02
KRH09786 Soybean plasma membrane 54.46 63.83
PGSC0003DMT400014548 Potato plasma membrane 54.34 63.3
CDY39649 Canola plasma membrane 54.34 63.11
KRH23534 Soybean plasma membrane 49.49 62.78
VIT_04s0008g04980.t01 Wine grape plasma membrane 53.44 62.63
VIT_11s0016g04740.t01 Wine grape plasma membrane 53.32 61.93
KRH61813 Soybean plasma membrane 51.91 61.48
Bra037053.1-P Field mustard plasma membrane 51.66 61.46
VIT_09s0002g05810.t01 Wine grape plasma membrane 53.83 61.43
KRH52492 Soybean plasma membrane 51.15 61.22
CDY13492 Canola plasma membrane 51.53 61.21
CDY37274 Canola plasma membrane 53.32 61.2
Bra008167.1-P Field mustard plasma membrane 53.32 61.2
AT1G15460.1 Thale cress cytosol, golgi, peroxisome 53.32 61.2
CDX72362 Canola plasma membrane 51.53 61.12
CDY68117 Canola plasma membrane 53.19 61.05
CDX68852 Canola plasma membrane 51.91 60.75
Solyc03g120020.2.1 Tomato plasma membrane 53.95 60.6
AT1G74810.4 Thale cress plasma membrane 52.55 60.32
KRH05103 Soybean plasma membrane 50.64 59.88
CDX80510 Canola plasma membrane 51.15 59.76
AT4G32510.2 Thale cress plasma membrane 51.4 59.7
AT5G25430.1 Thale cress golgi, peroxisome, plasma membrane 51.02 59.61
CDX88179 Canola plasma membrane 50.89 59.38
Bra009840.1-P Field mustard plasma membrane 50.13 59.37
PGSC0003DMT400073484 Potato mitochondrion, plasma membrane 39.29 59.23
CDY46028 Canola cytosol, golgi, plasma membrane 38.9 57.22
Solyc08g066960.2.1 Tomato plasma membrane 54.46 52.46
HORVU5Hr1G022140.1 Barley cytosol, golgi, plasma membrane 46.05 50.7
Solyc06g067900.1.1 Tomato golgi 21.94 49.28
Zm00001d048447_P002 Maize cytosol 51.66 46.66
CDX75250 Canola plastid 53.19 34.32
Bra026129.1-P Field mustard plasma membrane 54.46 27.21
CDY36563 Canola plasma membrane 54.21 27.05
CDX68853 Canola plastid 1.4 2.08
Protein Annotations
EnsemblPlants:HORVU1Hr1G025890.7EnsemblPlantsGene:HORVU1Hr1G025890GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575
GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0015698GO:GO:0016020GO:GO:0016021
InterPro:HCO3_transpt_CInterPro:HCO3_transpt_eukPANTHER:PTHR11453PANTHER:PTHR11453:SF31PFAM:PF00955SEG:seg
TMHMM:TMhelixUniParc:UPI000B46D095UniProt:A0A287EZ54MapMan:24.2.3.6::
Description
No Description!
Coordinates
chrchr1H:-:128157786..128163756
Molecular Weight (calculated)
88049.5 Da
IEP (calculated)
9.640
GRAVY (calculated)
0.051
Length
784 amino acids
Sequence
(BLAST)
001: KWGKGKKAAT PPAPRLRLPS SARRRRVSHP ASRWRRHCRC GTARLRRPAS PPPPHPAPPQ PRTSLLAMEP KKTLFKGVIE DFGGRAACYK QDWHNGFSSG
101: FRILAPTLYI FFASALPVIA FGEQLSKDTD GTLTTVETLA STALCGIIHS LLGGQPLLIV GVAEPTIIMY TYIYNFAKNQ PNLGERLFLA WAGWVCIWTA
201: VMLFLMAMFN AAAALNRFTR FAGELFGMLI TILFMQQAIK GMLSEFSVPE DKDQSLPIYQ FHWVYINGLL GVIFSMGLLY TALRSRSARS SLYGTGWLRN
301: LIADYGVPLM VILWTALSYS LPSKIPSGVP RRLFTPLPWE PKSLQHWTVA KDLFSVPPNY IFLAIVPAVM VAGLYFFDHS VASQMAQQKE FNLKNPSAYH
401: YDIMVLSCSV LICGLLGIPP SNGVLPQAPM HTRSLAVLRR QALRKQMVRT AKEGMMNNAS SSEVYGKMQE VFIKMDDKGS EGSAHKELKE LKDAVITEGN
501: GAGSGPEVFD PEKHLEAYLP VRVNEQRVSN LLQSLLVAGC VGIVPVIQRI PTSVLWGYFA YMSIDSLPGN QFWERIQLLF IAPQRRYKYA PFATPVSLHF
601: CPAYAKQPMH FGFGQVIQEA GTWSEYSSAV ILDRVLEGAH ASFLESVPFN KILAFTIFQL IYLLIVWGMT WIPVAGILFP LLFFFLVVIR EHFLPKFFAA
701: RHLWELDASE YEECEGMRRD PSISEGDGEA PAEYASEVME EFTTHRGELK HRAPSFRDER LIRLNSVQMT RQFSRISSLT PTRP
Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)
001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.