Factsheet for PGSC0003DMT400074816

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
golgi 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, golgi, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g066960.2.1	Tomato	plasma membrane	97.1	78.26
VIT_04s0008g04980.t01	Wine grape	plasma membrane	73.32	71.9
KRH52492	Soybean	plasma membrane	70.73	70.84
KRH61813	Soybean	plasma membrane	70.73	70.09
GSMUA_Achr2P19680_001	Banana	plasma membrane	70.43	69.47
PGSC0003DMT400014548	Potato	plasma membrane	70.27	68.5
Bra037053.1-P	Field mustard	plasma membrane	68.75	68.44
CDY13492	Canola	plasma membrane	68.75	68.33
CDX72362	Canola	plasma membrane	68.6	68.08
TraesCS3A01G126300.1	Wheat	golgi	68.45	67.42
HORVU3Hr1G023560.1	Barley	plasma membrane	67.84	66.82
HORVU3Hr1G023480.4	Barley	plasma membrane	67.84	66.82
CDX68852	Canola	plasma membrane	67.99	66.57
PGSC0003DMT400073484	Potato	mitochondrion, plasma membrane	52.74	66.54
TraesCS4D01G326900.1	Wheat	plasma membrane	67.38	66.37
KRH05103	Soybean	plasma membrane	67.07	66.36
TraesCS4B01G330000.1	Wheat	plasma membrane	67.23	66.12
TraesCS3B01G145500.3	Wheat	plasma membrane	67.99	66.07
CDX88179	Canola	plasma membrane	67.68	66.07
Bra009840.1-P	Field mustard	plasma membrane	66.62	66.01
TraesCS7B01G475400.1	Wheat	plasma membrane	66.16	65.76
Os01t0175600-01	Rice	plasma membrane	67.07	65.48
CDX80510	Canola	plasma membrane	66.92	65.42
GSMUA_Achr5P06140_001	Banana	plasma membrane	66.46	65.37
HORVU4Hr1G081330.4	Barley	plasma membrane	66.92	65.23
TraesCS5A01G501500.1	Wheat	plasma membrane	66.31	65.22
Os01t0175700-01	Rice	plasma membrane	66.77	65.18
AT4G32510.2	Thale cress	plasma membrane	66.92	65.04
Zm00001d039647_P001	Maize	plasma membrane	66.31	64.93
OQU86222	Sorghum	plasma membrane	65.55	64.86
AT5G25430.1	Thale cress	golgi, peroxisome, plasma membrane	66.01	64.53
Os05t0176800-01	Rice	plasma membrane	64.79	62.78
HORVU0Hr1G032340.2	Barley	plasma membrane	48.32	62.52
KXG21448	Sorghum	plasma membrane	64.63	61.72
TraesCS3D01G127300.4	Wheat	plasma membrane	66.01	61.07
Zm00001d009789_P006	Maize	plasma membrane	64.18	60.32
Zm00001d042982_P001	Maize	plasma membrane	58.54	58.09
TraesCS1B01G137300.2	Wheat	mitochondrion, plasma membrane	63.57	55.38
TraesCS1D01G118600.2	Wheat	plasma membrane	63.72	54.5
TraesCS1A01G117500.3	Wheat	plasma membrane	63.72	54.36
HORVU1Hr1G025890.7	Barley	plastid	64.02	53.57
PGSC0003DMT400013372	Potato	plasma membrane	57.93	52.78
PGSC0003DMT400069678	Potato	plasma membrane	57.32	52.59
PGSC0003DMT400046121	Potato	plasma membrane	55.64	51.19
Zm00001d048447_P002	Maize	cytosol	50.91	38.48
CDX75250	Canola	plastid	67.68	36.54
CDX68853	Canola	plastid	0.15	0.19

Protein Annotations

EntrezGene:102599675	MapMan:24.2.3.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575
GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021
InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	UniProt:M1CU78	PFAM:PF00955	EnsemblPlantsGene:PGSC0003DMG400029090	PGSC:PGSC0003DMG400029090
EnsemblPlants:PGSC0003DMT400074816	PANTHER:PTHR11453	PANTHER:PTHR11453:SF40	TMHMM:TMhelix	UniParc:UPI0002949B0C	RefSeq:XP_006364282.1
SEG:seg	:	:	:	:	:

Description

Anion exchanger family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400029090]

Coordinates

chr8:+:39947858..39954163

Molecular Weight (calculated)

74235.0 Da

IEP (calculated)

7.232

GRAVY (calculated)

0.180

Length

656 amino acids

Sequence
(BLAST)

001: MEKPKTPFKG VIDDVKGRMA CYKRDWLDSC GTGVRILAPT AYIFFASALP VIAFGEQLSR ETDGAMSTVE TLASTAICGI IHSIFGGQPL LILGVAEPTI
101: IMYTYLYNFV KDRPEMGPKL FVAWAGWVCV WTALMLFLLA IFNACNIIPR FTRLAGELFG MLITVLFLQE AIKGVVSEFS IPKGENPERE EFHFEWLYTN
201: GLLAVIFSFG VLLASLKSRG ARSWRYGTGW MRSFIADYGV PLMVVLWTAM SFGVPGKIPS EVPRRLFCPL PWEAKSLYHW TVMKDMVRVP VLYIFAAFIP
301: ALMIAGLYFF DHSVAAQMAQ QNEFNLKNPS AYHYDLFLLG VMTLICGLLG IPPSNGVLPQ SPMHTRSLAV LKRQLIRKKM VKSAKEGIKQ NATKSEIYGK
401: MHAVFVEMDA TSKRTADKDL ENLKAAVMKH DDGENGTDGK FDPEKHIDAH LPVRVNEQRV SNFLQSLLVG CSVFAIPVIR RIPTSVLWGY FAYMAIDSLP
501: GNQFWERLLL LLIPSGRRFK VFEGLHASYV ASVPFKYIVK FTMLQFVYFL ICFGVTWIPI AGILFPVLFF LLIAIREHVL PKFFPYEYLK ELDAAEYEEI
601: AGVPKEREIS DEENDDDFSD SEILDEMTTH RGELKHRSVS LTERQHQVYP HDASEM

Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)

001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.