Factsheet for TraesCS3D01G127300.4

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G145500.3	Wheat	plasma membrane	87.73	92.15
TraesCS3A01G126300.1	Wheat	golgi	86.32	91.89
HORVU3Hr1G023560.1	Barley	plasma membrane	86.18	91.74
HORVU3Hr1G023480.4	Barley	plasma membrane	86.18	91.74
TraesCS4D01G326900.1	Wheat	plasma membrane	79.55	84.68
Os01t0175700-01	Rice	plasma membrane	76.45	80.65
Os01t0175600-01	Rice	plasma membrane	74.89	79.02
OQU86222	Sorghum	plasma membrane	73.77	78.88
Zm00001d039647_P001	Maize	plasma membrane	73.91	78.21
GSMUA_Achr2P19680_001	Banana	plasma membrane	64.32	68.57
PGSC0003DMT400014548	Potato	plasma membrane	63.61	67.01
KRH09786	Soybean	plasma membrane	62.48	66.22
PGSC0003DMT400074816	Potato	plasma membrane	61.07	66.01
VIT_11s0016g04740.t01	Wine grape	plasma membrane	62.2	65.33
Solyc03g120020.2.1	Tomato	plasma membrane	64.03	65.04
VIT_04s0008g04980.t01	Wine grape	plasma membrane	61.35	65.02
GSMUA_Achr5P06140_001	Banana	plasma membrane	60.93	64.77
CDY39649	Canola	plasma membrane	61.35	64.44
KRH23534	Soybean	plasma membrane	56.14	64.4
AT1G15460.1	Thale cress	cytosol, golgi, peroxisome	61.21	63.54
VIT_09s0002g05810.t01	Wine grape	plasma membrane	61.07	63.03
KRH61813	Soybean	plasma membrane	58.82	62.99
KRH52492	Soybean	plasma membrane	57.97	62.75
CDX88179	Canola	plasma membrane	59.38	62.65
Bra009840.1-P	Field mustard	plasma membrane	58.39	62.54
PGSC0003DMT400073484	Potato	mitochondrion, plasma membrane	45.84	62.5
CDX80510	Canola	plasma membrane	58.96	62.3
CDY68117	Canola	plasma membrane	59.66	61.93
Bra008167.1-P	Field mustard	plasma membrane	59.66	61.93
CDY37274	Canola	plasma membrane	59.66	61.93
Bra037053.1-P	Field mustard	plasma membrane	57.26	61.61
CDY13492	Canola	plasma membrane	57.12	61.36
CDX72362	Canola	plasma membrane	57.12	61.27
AT5G25430.1	Thale cress	golgi, peroxisome, plasma membrane	57.83	61.1
AT1G74810.4	Thale cress	plasma membrane	58.82	61.05
CDX68852	Canola	plasma membrane	57.4	60.75
AT4G32510.2	Thale cress	plasma membrane	57.69	60.59
KRH05103	Soybean	plasma membrane	56.28	60.18
TraesCS1D01G118600.2	Wheat	plasma membrane	64.46	59.58
CDY46028	Canola	cytosol, golgi, plasma membrane	43.86	58.35
Solyc08g066960.2.1	Tomato	plasma membrane	60.23	52.46
Solyc06g067900.1.1	Tomato	golgi	24.96	50.72
TraesCS5D01G097600.1	Wheat	plasma membrane	50.78	50.56
CDX75250	Canola	plastid	57.26	33.42
Bra026129.1-P	Field mustard	plasma membrane	61.35	27.72
CDY36563	Canola	plasma membrane	61.21	27.63
CDX68853	Canola	plastid	0.28	0.38

Protein Annotations

EnsemblPlants:TraesCS3D01G127300.4	EnsemblPlantsGene:TraesCS3D01G127300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575
GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_euk	PANTHER:PTHR11453	PANTHER:PTHR11453:SF40	PFAM:PF00955	TMHMM:TMhelix	MapMan:24.2.3.6

Description

No Description!

Coordinates

chr3D:-:84911227..84915224

Molecular Weight (calculated)

79215.3 Da

IEP (calculated)

7.942

GRAVY (calculated)

0.318

Length

709 amino acids

Sequence
(BLAST)

001: MDLLGNPFKG VVGDVKGRAS WYKDDWVAGL RTGFRILAPT MYIFFASALP VISFGEQLSN ETDGILSTVE TLASTAICGI IHAILGGQPL LIVGVAEPTI
101: IMYTYLYKFA KKQPDLGEQL YLAWAGWVCI WTAIMLFLLA MFNASNVISR FTRVAGELFG MLITVLFLQQ AIKVCHVQQI VALYSALLKM PNTGPYLLQG
201: IVSEFSMPKD DEISDPSSPI YQFQWIYVNG LLGVIFSIGL LYTALKTRRA RSWLYGIGWL RSFIADYGVP LMVIVWTAFS FTLPSKVPSG VPRRLFSPLP
301: WESISLRHWT VAKDLFSVPP TYIFAAIVPA LMVAGLYFFD HSVASQLAQQ KEFNLKKPSA YHYDILVLGF MVLLCGLLGI PPSNGVLPQS PMHTRSLAVL
401: KGQLLRKKML QTAKEGMSNR ASSLEIYGKM QEVFIQMDSN QNANSVDKDL KSLKDAVLWE GDEEGKLAGE FDPSKYIEAH LPVRVNEQRL SNLLQSLLVG
501: GCVGAMPVIK MIPTSVLWGY FAYMAIDSLP GNQFWERLQL LCIGASRRYK VLEGPHASFV ESVPSRTISA FTVFQFVYLL ICFGITWIPV AGILFPLPFF
601: IMILIRQHLL PKFFEPNDLR ELDAAEYEEL EGVPHEQTLV RVQLGFSAKL SICPDFVSFS ATPQGVLSIL CYSETLVSSR RRKMAQIQEA VTAETTLKYW
701: MSSQQTVES

Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)

001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.