CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026129.1-P	Field mustard	plasma membrane	99.17	99.3
CDY39649	Canola	plasma membrane	42.46	98.81
AT1G15460.1	Thale cress	cytosol, golgi, peroxisome	39.21	90.19
CDY68117	Canola	plasma membrane	36.79	84.63
CDY37274	Canola	plasma membrane	36.73	84.48
CDY46028	Canola	cytosol, golgi, plasma membrane	27.63	81.43
GSMUA_Achr2P19680_001	Banana	plasma membrane	28.64	67.67
HORVU3Hr1G023480.4	Barley	plasma membrane	28.45	67.12
HORVU3Hr1G023560.1	Barley	plasma membrane	28.45	67.12
TraesCS3A01G126300.1	Wheat	golgi	28.2	66.52
CDX72362	Canola	plasma membrane	27.88	66.26
CDY13492	Canola	plasma membrane	27.82	66.21
GSMUA_Achr5P06140_001	Banana	plasma membrane	27.88	65.67
TraesCS4D01G326900.1	Wheat	plasma membrane	27.82	65.62
OQU86222	Sorghum	plasma membrane	27.69	65.61
Zm00001d039647_P001	Maize	plasma membrane	27.94	65.52
CDX68852	Canola	plasma membrane	27.94	65.52
TraesCS3B01G145500.3	Wheat	plasma membrane	28.13	65.48
Os05t0176800-01	Rice	plasma membrane	28.2	65.44
TraesCS4B01G330000.1	Wheat	plasma membrane	27.75	65.37
HORVU4Hr1G081330.4	Barley	plasma membrane	27.94	65.23
TraesCS5A01G501500.1	Wheat	plasma membrane	27.69	65.22
Os01t0175700-01	Rice	plasma membrane	27.82	65.03
TraesCS7B01G475400.1	Wheat	plasma membrane	27.31	65.0
Os01t0175600-01	Rice	plasma membrane	27.75	64.88
CDX88179	Canola	plasma membrane	27.56	64.43
CDX80510	Canola	plasma membrane	27.37	64.08
HORVU0Hr1G032340.2	Barley	plasma membrane	20.31	62.92
KXG21448	Sorghum	plasma membrane	27.05	61.86
TraesCS3D01G127300.4	Wheat	plasma membrane	27.63	61.21
Zm00001d009789_P006	Maize	plasma membrane	26.8	60.32
Zm00001d042982_P001	Maize	plasma membrane	24.25	57.64
CDY37790	Canola	plasma membrane	25.27	56.39
CDX80082	Canola	plasma membrane	25.21	56.25
CDY51414	Canola	plasma membrane	24.95	55.84
CDY27507	Canola	plasma membrane	24.95	55.84
CDX93980	Canola	plasma membrane	25.08	55.81
CDY50920	Canola	plasma membrane	24.95	55.68
CDX83341	Canola	plasma membrane	24.89	55.54
TraesCS1B01G137300.2	Wheat	mitochondrion, plasma membrane	26.42	55.11
TraesCS1D01G118600.2	Wheat	plasma membrane	26.67	54.63
TraesCS1A01G117500.3	Wheat	plasma membrane	26.61	54.36
HORVU1Hr1G025890.7	Barley	plastid	27.05	54.21
CDX74103	Canola	plasma membrane	23.87	50.81
CDY08050	Canola	plasma membrane	23.74	50.61
CDY69873	Canola	golgi, plasma membrane	15.66	50.2
Zm00001d048447_P002	Maize	cytosol	20.88	37.79
CDY37788	Canola	cytosol	2.93	37.7
CDX75250	Canola	plastid	27.82	35.97
CDY37789	Canola	endoplasmic reticulum, golgi	4.71	33.18
CDX68853	Canola	plastid	0.06	0.19

Protein Annotations

MapMan:17.1.3.2.1.3.5	Gene3D:2.130.10.10	MapMan:24.2.3.6	GO:A0A078HIE8	UniProt:A0A078HIE8	EnsemblPlants:CDY36563
ProteinID:CDY36563	ProteinID:CDY36563.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150
GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0035445	EnsemblPlantsGene:GSBRNA2T00062250001	InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_euk	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PFAM:PF00955
PFAM:PF04003	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR11453
PANTHER:PTHR11453:SF48	InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SUPFAM:SSF50978	SUPFAM:SSF50998	InterPro:SSU_processome_Utp12
TMHMM:TMhelix	UniParc:UPI0004EE3DFF	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

BnaA06g10160DBnaA06g10160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIE8]

Coordinates

chrLK032378:-:167117..174193

Molecular Weight (calculated)

176438.0 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.111

Length

1571 amino acids

Sequence
(BLAST)

0001: MEKEISSKRP FRGIIADLKG RALCYKQDWI TGLRSDFGIL APTTYIFFAS ALPVIAFGEQ LSRDTDGALS TVETLASTAL CGVIHSILGG QPLLILGVAE
0101: PTVLMYVYLY NFAKGRPELG KELYLAWVAW VCVWTAMLLF LMATLNAADI INRFTRVAGE LFGMLISVLF IQQAIKGMVG EFSMPKEGDS KLEKYKFEWL
0201: YTNGLLGLIF TFGLLYTALK SRKARSWRYG TGWYRSFIAD YGVPLMVVVW TALSFTTPSK LPSGVPRRLF SPLPWDSASL EHWTVIKDMG KVSPEYIFAA
0301: FIPALMIAGL YFFDHSVASQ LAQQKEFNLK NPSAYHYDIL LLGFMTLICG LLGLPPSNGV LPQSPMHTKS LAVLKRQLIR RKMVKTAKES IRKRATSSEV
0401: YENMQEVFIE MDKSPIAQTN RTVILELQDL KEAVMKSNED EGERDEESGF DPEKHLDAYL PVRVNEQRVS NLLQSLLVAG AVLAMPAIKL MPTSVLWGYF
0501: AYMAIDSLPG NQFFERMMLL FVLPSRRFKV LEGAHASFVE KVPYKSMAAF TILQIVYFGI CYGVTWIPVA GIMFPVPFFL LIAIRQYILP KLFNPSHLRE
0601: LDAAEYEEIP GTPRDPLELS FRATDTTKGV PENDAEIFDE LTTRRGELKV RTLSLNEDKG NQIYPKEKVQ AEDETRVLRD NFVTDPQAMN YRFQNLLGAP
0701: YRGGNAVVTQ NTQLISPVGN RVSVTDLTKH HTVTLELSTS TNICRLAASP DGTFLMAVDE NSRCLFINVP RRAVLHRMTF KGKVGALKFS PDGRFIAVGV
0801: GKLVEIWESP GFSRAAFAFQ RVRTFASSDD KVVSLEWSLD SEYLLVGTKD LAARLFCVRK LKGVLNKPYL FLGHRDSVVG CFFGVDKMTN KVNRAFTVAR
0901: DGYMFSWGYS GNDVEAEESL SPDTPERADE SDIDIKKRKE YEGRGREDED EDEDEEYMHK GKWVLLRKDG FNQGSAKVTA CDYHQGLDMV VVGFSNGVFG
1001: LYQMPDFICI HLLSISREKL TTAVFNQRGN WLTFGCAKLG QLLVWEWRSE SYILKQQGHY FDVNCVTYSS DSQFLATGAD DNKVKVWNVA SGSCFITFTE
1101: HTNAVTALHF MADNHSLLSA SLDGTVRAWD FRRYKNYKTY TTPTPRQFVS LTADPSGDVV CAGTLDSFEI FVWSKKTGQI KDILNGHEAP VHGLMFSPLT
1201: QILASSSWDN TVRLWDVFAS KGTVETFQHN HDVLTVTFRP DGKQLASCTL DGQIHFWDTV DGVLMYTIEG RRDIAGGRNM TDRRSAANSS SGKCFTTLCY
1301: SADGSYILAA GNSRYICMYD ISDQVLLRRF QISHNLSYDG VLDFLNSKKM TEAGPMDLIE DDNSDEEDGI DKQSRGNLGY DLPGSKPNRG RPIIRTKSLS
1401: IAPTGRSFAA ATTEGVLIFS VDESFIFDPT DLDIDVTPEA VEDALKKDEV VRALALSMRL NEDSFIKKCI FAVAPADIKE VAISVPQKYL ERLMEALVDL
1501: LENCPHLEFL LHWCQEICKA HGSSIQRNYR NLLPSLKSLQ KAITRAHQDL ADMCSSNEYT LRYLCSVPNN H

Best Arabidopsis Sequence Match ( AT1G15440.1 )
(BLAST)

001: MEFRFENLLG APYRGGNAVI TKNTQLISPV GNRVSVTDLS KNHSVTLPLE TSTNICRLAS SPDGTFLLAV DEQNRCLFIN LPRRVVLHRI TFKDKVGALK
101: FSPNGKFIAV GIGKLVEIWR SPGFRRAVLP FERVRTFANS DDKVVSLEWS LDSDYLLVGS RDLAARLFCV RKLKGVLNKP FLFLGHRDSV VGCFFGVDKM
201: TNKVNRAFTI ARDGYIFSWG YTEKDVKMDE SEDGHSEPPS PVTPDRADEV MVENGGGVGT ELKKRKEYDG KGLESDEEGD DDDEEYMHRG KWVLLRKDGC
301: NQASAKVTAC DYHQGLDMVV VGFSNGVFGL YQMPDFICIH LLSISRQKLT TAVFNERGNW LTFGCAKLGQ LLVWDWRTET YILKQQGHYF DVNCVTYSPD
401: SQLLATGADD NKVKVWNVMS GTCFITFTEH TNAVTALHFM ADNHSLLSAS LDGTVRAWDF KRYKNYKTYT TPTPRQFVSL TADPSGDVVC AGTLDSFEIF
501: VWSKKTGQIK DILSGHEAPV HGLMFSPLTQ LLASSSWDYT VRLWDVFASK GTVETFRHNH DVLTVAFRPD GKQLASSTLD GQINFWDTIE GVLMYTIEGR
601: RDIAGGRVMT DRRSAANSSS GKCFTTLCYS ADGGYILAAG TSRYICMYDI ADQVLLRRFQ ISHNLSLDGV LDFLHSKKMT EAGPIDLIDD DNSDEEGGID
701: KQSRGNLGYD LPGSRPNRGR PIIRTKSLSI APTGRSFAAA TTEGVLIFSI DDTFIFDPTD LDIDVTPEAV EAAIEEDEVS RALALSMRLN EDSLIKKCIF
801: AVAPADIKAV AISVRQKYLE RLMEALVDLL ENCPHLEFIL HWCQEICKAH GSSIQRNYRT LLPALRSLQK AITRAHQDLA DMCSSNEYTL RYLCSVPNNH

Arabidopsis Description

PWP2Periodic tryptophan protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.