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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • golgi 2
  • endoplasmic reticulum 1
  • plasma membrane 1
  • vacuole 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:secretory
MultiLoc:golgi
PProwler:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G023560.1 Barley plasma membrane 95.05 95.05
HORVU3Hr1G023480.4 Barley plasma membrane 95.05 95.05
TraesCS3B01G145500.3 Wheat plasma membrane 96.1 94.81
TraesCS5A01G501500.1 Wheat plasma membrane 88.89 88.76
TraesCS3D01G127300.4 Wheat plasma membrane 91.89 86.32
Os01t0175700-01 Rice plasma membrane 84.23 83.48
Os01t0175600-01 Rice plasma membrane 83.03 82.29
OQU86222 Sorghum plasma membrane 80.48 80.84
Zm00001d039647_P001 Maize plasma membrane 81.08 80.6
GSMUA_Achr2P19680_001 Banana plasma membrane 70.87 70.98
KRH09786 Soybean plasma membrane 68.92 68.61
PGSC0003DMT400074816 Potato plasma membrane 67.42 68.45
PGSC0003DMT400014548 Potato plasma membrane 68.77 68.05
GSMUA_Achr5P06140_001 Banana plasma membrane 67.72 67.62
VIT_11s0016g04740.t01 Wine grape plasma membrane 68.02 67.11
VIT_04s0008g04980.t01 Wine grape plasma membrane 67.27 66.97
KRH23534 Soybean plasma membrane 61.86 66.67
CDY39649 Canola plasma membrane 66.82 65.93
Solyc03g120020.2.1 Tomato plasma membrane 68.62 65.47
AT1G15460.1 Thale cress cytosol, golgi, peroxisome 66.82 65.15
VIT_09s0002g05810.t01 Wine grape plasma membrane 66.97 64.92
KRH61813 Soybean plasma membrane 63.96 64.35
KRH52492 Soybean plasma membrane 63.21 64.27
PGSC0003DMT400073484 Potato mitochondrion, plasma membrane 50.15 64.23
CDX88179 Canola plasma membrane 64.26 63.69
Bra009840.1-P Field mustard plasma membrane 63.21 63.6
CDY37274 Canola plasma membrane 65.02 63.4
CDX80510 Canola plasma membrane 63.81 63.34
CDY68117 Canola plasma membrane 64.86 63.25
Bra008167.1-P Field mustard plasma membrane 64.86 63.25
Bra037053.1-P Field mustard plasma membrane 62.46 63.13
CDY13492 Canola plasma membrane 62.46 63.03
CDX72362 Canola plasma membrane 62.46 62.93
AT1G74810.4 Thale cress plasma membrane 64.11 62.52
AT5G25430.1 Thale cress golgi, peroxisome, plasma membrane 62.61 62.15
CDX68852 Canola plasma membrane 62.46 62.09
AT4G32510.2 Thale cress plasma membrane 62.91 62.07
KRH05103 Soybean plasma membrane 61.71 61.99
TraesCS1A01G117500.3 Wheat plasma membrane 70.12 60.73
CDY46028 Canola cytosol, golgi, plasma membrane 47.9 59.85
Solyc08g066960.2.1 Tomato plasma membrane 66.52 54.42
Solyc06g067900.1.1 Tomato golgi 28.08 53.58
TraesCS5A01G085200.1 Wheat plasma membrane 54.95 51.4
CDX75250 Canola plastid 62.31 34.16
Bra026129.1-P Field mustard plasma membrane 66.82 28.36
CDY36563 Canola plasma membrane 66.52 28.2
CDX68853 Canola plastid 0.3 0.38
Protein Annotations
EnsemblPlants:TraesCS3A01G126300.1EnsemblPlantsGene:TraesCS3A01G126300GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575
GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_eukPANTHER:PTHR11453PANTHER:PTHR11453:SF40PFAM:PF00955SEG:segTMHMM:TMhelix
MapMan:24.2.3.6:::::
Description
No Description!
Coordinates
chr3A:-:101893744..101898362
Molecular Weight (calculated)
74062.4 Da
IEP (calculated)
6.515
GRAVY (calculated)
0.206
Length
666 amino acids
Sequence
(BLAST)
001: MDLLGNPFKG VVADVKGRAS WYRDDWVAGL RTGFRILAPT MYIFFASALP VISFGEQLSN ETDGILSTVE TLASTAICGI IHSILGGQPL LIVGVAEPTI
101: IMYTYLYKFA KKQPDLGEQL YLAWAGWVCI WTAIMLFLLA MFNASNIISR FTRVAGELFG MLITVLFLQQ AIKGIVSEFS MPKDDEISDP SSPIYQFQWI
201: YVNGLLGVIF SIGLLYTALK TRRARSWLFG IGWLRSFIAD YGVPLMVIVW TAFSFALPSK VPSGVPRRLF SPLPWESISL RHWTVAKDLF SVPPTYIFAA
301: IVPALMVAGL YFFDHSVASQ LAQQKEFNLK KPSAYHYDIL VLXXXVLLCG LLGIPPSNGV LPQSPMHTRS LAVLKGQLLR KKMLQTAKEG MSNRASSLEI
401: YGKMQEVFIQ MDSNMNANSV DKDLKSLKDA VLREGDEEGK LAGEFDPSKH IEAHLPVRVN EQRLSNLLQS LLVGGCVGAM PVIKMIPTSV LWGYFAYMAI
501: DSLPGNQFWE RLQLLCIGAS RRYKVLEGPH ASFVESVPSR TISAFTVFQF VYLLICFGIT WIPVAGILFP LPFFIMILIR QHLLPKFFEP NDLRELDAAE
601: YEELEGVPHE QTPEEDGSNS GSCDSRDDSE ILDELTTNRG ELKHRSVSHP EERHLQIHSN AVQPSV
Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)
001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.