Factsheet for TraesCS5A01G085200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 23596187

gfp PMID: 23596187 doi

S Leaungthitikanchana, T Fujibe, M Tanaka, S Wang, N Sotta, J Takano, T Fujiwara

Graduate School of Agricultural and Life Sciences, University of Tokyo, Yayoi, Bunkyo-ku, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G091200.1	Wheat	plasma membrane	99.02	99.02
TraesCS5D01G097600.1	Wheat	plasma membrane	98.74	98.74
HORVU5Hr1G022140.1	Barley	cytosol, golgi, plasma membrane	97.61	97.61
KXG23716	Sorghum	plasma membrane	91.99	92.38
Zm00001d030656_P001	Maize	plasma membrane	91.01	91.4
Zm00001d041590_P001	Maize	plasma membrane	90.03	91.31
Os12t0566000-02	Rice	plasma membrane	91.01	91.14
GSMUA_Achr3P12750_001	Banana	plasma membrane	84.27	83.45
GSMUA_Achr3P24480_001	Banana	golgi, peroxisome, plasma membrane	83.15	82.34
VIT_07s0005g02060.t01	Wine grape	plasma membrane	81.18	80.61
PGSC0003DMT400013372	Potato	plasma membrane	79.49	78.61
CDX93980	Canola	plasma membrane	77.81	78.47
CDX83341	Canola	plasma membrane	77.53	78.41
Bra014404.1-P	Field mustard	plasma membrane	77.81	78.36
Solyc01g079150.2.1	Tomato	plasma membrane	79.21	78.33
Bra000442.1-P	Field mustard	plasma membrane	77.25	78.24
CDY50920	Canola	plasma membrane	77.25	78.12
CDX80082	Canola	plasma membrane	77.25	78.12
VIT_05s0020g00440.t01	Wine grape	plasma membrane	78.65	78.1
CDY51414	Canola	plasma membrane	76.83	77.92
Bra021386.1-P	Field mustard	plasma membrane	76.69	77.89
CDY37790	Canola	plasma membrane	76.97	77.84
AT3G62270.1	Thale cress	plasma membrane	76.83	77.81
CDY27507	Canola	plasma membrane	76.69	77.78
KRG96573	Soybean	plasma membrane	78.93	77.73
KRH68309	Soybean	plasma membrane	78.51	77.32
Bra004476.1-P	Field mustard	plasma membrane	76.4	77.27
KRH36909	Soybean	plasma membrane	76.4	76.84
AT2G47160.2	Thale cress	plasma membrane	77.25	75.45
Solyc01g057770.2.1	Tomato	plasma membrane	75.42	75.32
PGSC0003DMT400046121	Potato	plasma membrane	75.28	75.18
KRH11879	Soybean	plasma membrane	65.03	73.96
CDY69873	Canola	golgi, plasma membrane	50.56	73.47
CDY37788	Canola	cytosol	9.83	57.38
TraesCS3A01G126300.1	Wheat	golgi	51.4	54.95
TraesCS5A01G501500.1	Wheat	plasma membrane	49.86	53.22
CDY37789	Canola	endoplasmic reticulum, golgi	15.73	50.22
TraesCS1A01G117500.3	Wheat	plasma membrane	49.86	46.16
KRH74995	Soybean	extracellular	4.49	38.55

Protein Annotations

EnsemblPlants:TraesCS5A01G085200.1	EnsemblPlantsGene:TraesCS5A01G085200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575
GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_euk	PANTHER:PTHR11453	PANTHER:PTHR11453:SF51	PFAM:PF00955	SEG:seg	TMHMM:TMhelix
MapMan:24.2.3.6	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:111623468..111627617

Molecular Weight (calculated)

79413.6 Da

IEP (calculated)

8.916

GRAVY (calculated)

0.190

Length

712 amino acids

Sequence
(BLAST)

001: MEESFVPLRG IKNDVRGRLT CYKQDWTGGF SAGIRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTALCGI IHSIVGGQPL LILGVAEPTV
101: IMYTFMFSFA KDRADLGPNL FLAWAGWVCV WTALLLFLLA VLGACSIINR FTRIAGELFG LLIAMLFMQQ AIKGLVDEFR IPERENIKAL QFVPSWRFAN
201: GMFAIVLSFG LLLTALRSRK ARSWRYGAGW LRGFIADYGV PLMVLVWTGV SYIPHDSVPK GIPRRLFSPN PWSPGAYDNW TVIKDMLQVP VMYIIGAFMP
301: ATMIAVLYYF DHSVASQLAQ QAEFNLRKPP SFHYDLLLLG FLTLMCGLIG IPPSNGVIPQ SPMHTKSLAT LKHQILRNRL VATARQSMRQ NASLSQLYNN
401: MQDAYHQIQT PLIHQQQTVK GLNELKDSTV QLASSMGNFD APVDETIFDI EKEIDDLLPM EVKEQRLSNF LQAVMVGGCV AAMPLLKKIP TAVLWGYFAF
501: MAIESLPGNQ FWERILLLFT APSRRYKVLE EYHTTFVETV PFKTIAMFTL FQTTYLLVCF GITWIPIAGV LFPLMIMLLV PVRQYILPKL FKGAHLNDLD
601: AAEYEESPAI PFNLAAQDID VALGRTQSAE ILDDMVTRSR GEIKRLNSPK ITSSGGTPVT ELKGIRSPCM SEKAYSPRVN ELRHERSPLG GRDSPRMGEA
701: RPSKLGEGST PK

Best Arabidopsis Sequence Match ( AT3G62270.1 )
(BLAST)

001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR APAREDLKLV EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLVADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP IVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKQ NASLGQLYGN
401: MQDVYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPLLKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLTCFGL TWIPIAGVMF PLLIMFLIPV RQYILPRFFK SAHLQDLDAA
601: EYEEAPALPF HLAVPEAEMG STASYPCDSE ILDEFITRSR GEFRHTCSPK VTSSTSTPVY NRNLSQVFSP RVIDLRGEMS PRLSGKGQNS PKPSPLNPSS
701: SSK

Arabidopsis Description

BOR2Probable boron transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1P7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.