Factsheet for GSMUA_Achr3P24480_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 1
plasma membrane 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P12750_001	Banana	plasma membrane	85.54	85.54
KXG23716	Sorghum	plasma membrane	83.87	85.05
Zm00001d030656_P001	Maize	plasma membrane	83.45	84.63
Zm00001d041590_P001	Maize	plasma membrane	82.61	84.62
Os12t0566000-02	Rice	plasma membrane	83.31	84.25
VIT_07s0005g02060.t01	Wine grape	plasma membrane	83.31	83.54
TraesCS5A01G085200.1	Wheat	plasma membrane	82.34	83.15
HORVU5Hr1G022140.1	Barley	cytosol, golgi, plasma membrane	82.06	82.87
TraesCS5D01G097600.1	Wheat	plasma membrane	82.06	82.87
TraesCS5B01G091200.1	Wheat	plasma membrane	82.06	82.87
Solyc01g079150.2.1	Tomato	plasma membrane	80.53	80.42
PGSC0003DMT400013372	Potato	plasma membrane	80.53	80.42
VIT_05s0020g00440.t01	Wine grape	plasma membrane	79.97	80.2
KRH36909	Soybean	plasma membrane	77.75	78.95
KRG96573	Soybean	plasma membrane	78.86	78.42
KRH68309	Soybean	plasma membrane	78.58	78.15
CDY37790	Canola	plasma membrane	76.22	77.84
CDY50920	Canola	plasma membrane	76.08	77.7
CDX80082	Canola	plasma membrane	76.08	77.7
AT3G62270.1	Thale cress	plasma membrane	75.94	77.67
CDX83341	Canola	plasma membrane	75.94	77.56
Bra000442.1-P	Field mustard	plasma membrane	75.66	77.38
Bra014404.1-P	Field mustard	plasma membrane	76.08	77.37
CDY51414	Canola	plasma membrane	75.52	77.35
CDX93980	Canola	plasma membrane	75.94	77.34
Bra021386.1-P	Field mustard	plasma membrane	75.38	77.32
CDY27507	Canola	plasma membrane	75.24	77.07
Bra004476.1-P	Field mustard	plasma membrane	75.24	76.85
KRH11879	Soybean	plasma membrane	66.2	76.04
PGSC0003DMT400046121	Potato	plasma membrane	74.27	74.89
Solyc01g057770.2.1	Tomato	plasma membrane	74.13	74.75
AT2G47160.2	Thale cress	plasma membrane	75.52	74.49
CDY69873	Canola	golgi, plasma membrane	49.65	72.86
GSMUA_Achr2P19680_001	Banana	plasma membrane	52.57	56.84
CDY37788	Canola	cytosol	9.32	54.92
GSMUA_Achr5P06140_001	Banana	plasma membrane	50.9	54.87
CDY37789	Canola	endoplasmic reticulum, golgi	16.41	52.91
KRH74995	Soybean	extracellular	4.31	37.35

Protein Annotations

EnsemblPlants:GSMUA_Achr3P24480_001	EnsemblPlants:GSMUA_Achr3T24480_001	EnsemblPlantsGene:GSMUA_Achr3G24480_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452
GO:GO:0005575	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0015698	GO:GO:0016020
GO:GO:0016021	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	PANTHER:PTHR11453	PANTHER:PTHR11453:SF51	PFAM:PF00955
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002964EEE	UniProt:M0SHG4	MapMan:24.2.3.6	:

Description

Probable boron transporter 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G24480_001]

Coordinates

chr3:+:24999500..25002521

Molecular Weight (calculated)

80170.5 Da

IEP (calculated)

9.421

GRAVY (calculated)

0.160

Length

719 amino acids

Sequence
(BLAST)

001: MEETFEPFHG IKNDLRGRLM CYKQDWSSGF NAGIRILAPT TYIFFASAIP VISFGEQLER NTDGVLTAVQ TLASTALCGI IHSIIGGQPL LILGVAEPTV
101: LMYTFMFNFV KDRADLGRNM FLAWTGWVCV WTAFLLFLLA ILGACSIINR FTRLAGELFG LLIAMLFMQQ AIKGLVDEFR IPKREDPRDV ALMSSWRFAN
201: GMFALVLSFG LLLTALRSRK ARSWRYGTGW LRGFIADYGV PLMVLVWTGV SYMPAGGVPR GIPRRLLSPN PWSPGAYQNW TVIKDMLNVP FLYILGAFIP
301: ATMIAVLYYF DHSVASQLAQ QQEFNLRKPP SFHYDLLLLG FLTLLCGLIG IPPSNGVIPQ SPMHTKSLAT LKHQLLRNRL VATARQSMSQ NSSLSQLYGS
401: MQDAYRQMQT PLIYQGQSAR GLKELKDSTV QLASSMGSMD APVDDSVFDI DKEIDDLLPV EVKEQRLSNL LQAMMVAGCV AAMPLLKKIP TSVLWGYFAF
501: MAIESLPGNQ FWERILLLFT APSRRYKVLE DYHATFVESV PFKAITAFTI FQTAYLLVCF GITWIPIAGV LFPLMIMLLV PVRQYILPKL FKGAHLTDLD
601: AAEYEESPAI TFNLPTEVDM GRGYSFSETR EVLDEIVTRS RGEIKHMNSP KVTSSGGTPA TDVRGLSSPR LSEKAYSPRV GELRPERSPR VGGRRAFSPR
701: MGEIKPSKLG EGGLNSPMK

Best Arabidopsis Sequence Match ( AT3G62270.1 )
(BLAST)

001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR APAREDLKLV EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLVADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP IVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKQ NASLGQLYGN
401: MQDVYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPLLKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLTCFGL TWIPIAGVMF PLLIMFLIPV RQYILPRFFK SAHLQDLDAA
601: EYEEAPALPF HLAVPEAEMG STASYPCDSE ILDEFITRSR GEFRHTCSPK VTSSTSTPVY NRNLSQVFSP RVIDLRGEMS PRLSGKGQNS PKPSPLNPSS
701: SSK

Arabidopsis Description

BOR2Probable boron transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1P7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.