Factsheet for VIT_05s0020g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36909	Soybean	plasma membrane	82.85	83.9
VIT_07s0005g02060.t01	Wine grape	plasma membrane	83.12	83.12
Os12t0566000-02	Rice	plasma membrane	80.89	81.58
KXG23716	Sorghum	plasma membrane	79.78	80.68
KRH11879	Soybean	plasma membrane	70.29	80.51
GSMUA_Achr3P12750_001	Banana	plasma membrane	80.47	80.25
GSMUA_Achr3P24480_001	Banana	golgi, peroxisome, plasma membrane	80.2	79.97
PGSC0003DMT400046121	Potato	plasma membrane	79.08	79.52
Solyc01g057770.2.1	Tomato	plasma membrane	78.8	79.24
HORVU5Hr1G022140.1	Barley	cytosol, golgi, plasma membrane	78.38	78.93
TraesCS5D01G097600.1	Wheat	plasma membrane	78.24	78.79
TraesCS5A01G085200.1	Wheat	plasma membrane	78.1	78.65
TraesCS5B01G091200.1	Wheat	plasma membrane	78.1	78.65
VIT_17s0000g08530.t01	Wine grape	plasma membrane	78.52	78.19
VIT_04s0008g04980.t01	Wine grape	plasma membrane	53.84	57.7
VIT_11s0016g04740.t01	Wine grape	plasma membrane	53.97	57.33
VIT_09s0002g05810.t01	Wine grape	plasma membrane	53.7	56.04

Protein Annotations

EntrezGene:100252933	wikigene:100252933	MapMan:24.2.3.6	ProteinID:ACJ02355	ProteinID:ACJ02355.1	EMBL:AM465280
ProteinID:CAN70359	ProteinID:CAN70359.1	ProteinID:CBI25978	ProteinID:CBI25978.3	UniProt:D7T657	EMBL:FJ263935
EMBL:FN595749	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0008509
GO:GO:0009987	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0051453
GO:GO:0098656	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	EntrezGene:LOC100252933	wikigene:LOC100252933	PFAM:PF00955
PANTHER:PTHR11453	PANTHER:PTHR11453:SF80	TIGR:TC68987	TMHMM:TMhelix	UniParc:UPI0001BE29B3	ArrayExpress:VIT_05s0020g00440
EnsemblPlantsGene:VIT_05s0020g00440	EnsemblPlants:VIT_05s0020g00440.t01	unigene:Vvi.18273	unigene:Vvi.203	RefSeq:XP_010649608.1	SEG:seg

Description

No Description!

Coordinates

chr5:-:2350468..2355844

Molecular Weight (calculated)

80187.4 Da

IEP (calculated)

8.977

GRAVY (calculated)

0.169

Length

717 amino acids

Sequence
(BLAST)

001: MEETFVPFRG IKNDLQGRLL CYKQDWTGGL RAGFRILAPT TYIFFASAIP VISFGEQLEK NTDGVLTAVQ TLASTALCGI IHSIIGGQPL LILGVAEPTV
101: LMYTFMFNFA KDRPDLGPKL FLAWTGWVCV WTSGLLFLLA ILGASSIINR FTRIAGELFG LLIAMLFMQE AIKGLIDEFR IPGRESPTLT EFQPSWRFAN
201: GMFALVLSFG LFLTALRSRK ARSWRYGSGC LRGFIADYGV PLMVLVWTAV SYIPAGSIPK GIPRRLFSPN PWSPGSYENW TIIKDMLNVP VLYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPP SFHYDLLLLG FMVILCGLIG IPPANGVIPQ SPMHTKSLAT LKHQLLRNRL VETARKCIRE NSSLGQMYES
401: MQEAYQHMQT PLVYQEPSAL GLKELKDSTI QLASSMGNME APIDETLFDI ENEIDDLLPV EVKEQRLSNL LQAIMVGGCV AAMPFLKKIP TSVLWGYFAF
501: MAVESLPGNQ FWERILLLFT APSRRYKVLE DYHATFVETV PFKTIAMFTI FQTAYLLVCF GITWVPIAGV LFPLMIMLLV PVRQYILPKF FKGAHLQDLD
601: AAEYEEVPAL SFNLTSEREL SRRSSFADHG EVLDGIITRG RGEIRRTCSL KMTSSTAMPS KDFKSTKSFS DRVCSPRITE LRGIRSPRFG GRGPFSPRTG
701: EARQSNLGKS GQNSDIN

Best Arabidopsis Sequence Match ( AT3G62270.1 )
(BLAST)

001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR APAREDLKLV EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLVADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP IVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKQ NASLGQLYGN
401: MQDVYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPLLKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLTCFGL TWIPIAGVMF PLLIMFLIPV RQYILPRFFK SAHLQDLDAA
601: EYEEAPALPF HLAVPEAEMG STASYPCDSE ILDEFITRSR GEFRHTCSPK VTSSTSTPVY NRNLSQVFSP RVIDLRGEMS PRLSGKGQNS PKPSPLNPSS
701: SSK

Arabidopsis Description

BOR2Probable boron transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1P7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.