Factsheet for VIT_11s0016g04740.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g04980.t01	Wine grape	plasma membrane	75.56	76.23
VIT_09s0002g05810.t01	Wine grape	plasma membrane	74.67	73.36
GSMUA_Achr2P19680_001	Banana	plasma membrane	71.11	72.18
GSMUA_Achr5P06140_001	Banana	plasma membrane	68.44	69.27
HORVU3Hr1G023480.4	Barley	plasma membrane	67.41	68.32
HORVU3Hr1G023560.1	Barley	plasma membrane	67.41	68.32
TraesCS3A01G126300.1	Wheat	golgi	67.11	68.02
Os01t0175700-01	Rice	plasma membrane	67.26	67.56
TraesCS7B01G475400.1	Wheat	plasma membrane	65.93	67.42
Zm00001d039647_P001	Maize	plasma membrane	66.37	66.87
Os01t0175600-01	Rice	plasma membrane	66.52	66.82
TraesCS3B01G145500.3	Wheat	plasma membrane	66.22	66.22
TraesCS4D01G326900.1	Wheat	plasma membrane	65.33	66.22
TraesCS5A01G501500.1	Wheat	plasma membrane	65.19	65.97
OQU86222	Sorghum	plasma membrane	64.74	65.91
TraesCS4B01G330000.1	Wheat	plasma membrane	64.89	65.67
HORVU4Hr1G081330.4	Barley	plasma membrane	65.33	65.53
HORVU0Hr1G032340.2	Barley	plasma membrane	48.89	65.09
Os05t0176800-01	Rice	plasma membrane	64.15	63.96
TraesCS3D01G127300.4	Wheat	plasma membrane	65.33	62.2
KXG21448	Sorghum	plasma membrane	63.26	62.15
Zm00001d009789_P006	Maize	plasma membrane	63.41	61.32
Zm00001d042982_P001	Maize	plasma membrane	57.93	59.15
TraesCS1B01G137300.2	Wheat	mitochondrion, plasma membrane	62.52	56.04
VIT_17s0000g08530.t01	Wine grape	plasma membrane	58.81	55.14
TraesCS1D01G118600.2	Wheat	plasma membrane	62.52	55.02
TraesCS1A01G117500.3	Wheat	plasma membrane	62.37	54.75
VIT_05s0020g00440.t01	Wine grape	plasma membrane	57.33	53.97
VIT_07s0005g02060.t01	Wine grape	plasma membrane	57.33	53.97
HORVU1Hr1G025890.7	Barley	plastid	61.93	53.32
Zm00001d048447_P002	Maize	cytosol	49.04	38.13

Protein Annotations

EntrezGene:100244133	wikigene:100244133	MapMan:24.2.3.6	EMBL:AM476425	ProteinID:CAN61936	ProteinID:CAN61936.1
ProteinID:CBI28149	ProteinID:CBI28149.3	UniProt:D7TBW4	EMBL:FN595756	GO:GO:0003674	GO:GO:0005215
GO:GO:0005452	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006820	GO:GO:0008150	GO:GO:0008509	GO:GO:0009987	GO:GO:0015698	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0051453	GO:GO:0098656	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk
EntrezGene:LOC100244133	wikigene:LOC100244133	PFAM:PF00955	PANTHER:PTHR11453	PANTHER:PTHR11453:SF40	TMHMM:TMhelix
UniParc:UPI0001BE3270	ArrayExpress:VIT_11s0016g04740	EnsemblPlantsGene:VIT_11s0016g04740	EnsemblPlants:VIT_11s0016g04740.t01	RefSeq:XP_002281778	RefSeq:XP_002281778.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:4037065..4041815

Molecular Weight (calculated)

76446.4 Da

IEP (calculated)

7.800

GRAVY (calculated)

0.153

Length

675 amino acids

Sequence
(BLAST)

001: MDNIKAPFKG IIKDFKGRKA CYKQDWTSAL RSGTSILAPT TYIFFASALP VIAFGEQLSR ETDGHLSTVE TLTSTAICGI IHSIFGGQPL LILGVAEPTV
101: IMYTYLYNFA KGRADLGREL FLAWTGWVCF WTALFLFLLA IFNACTIITK FTRIAGELFG MLIAVLFIQE AVKGVVSEFR IPKDEDPNSE KYQFQWLYSN
201: GLLAIIFSFG LLFTALKSRR ARSWSYGTGW SRGFIADYGV PLMVLVWTAL SFSVPSKVPS GVPRRLFSPL PWESASLQHW IVIKDMGKIP PAYILAAIIP
301: AVMIAGLYFF DHSVASQMSQ QKEFNLKNPS AYHYDILLLG VMTLLCGFLG LPPSNGVLPQ SPMHTKSLAV LKRRLIRRKM VQSAKECIKQ QASNTEIYRK
401: MQAVFIEMDM APSLLVTEEL KDLKEAIMKG EDGKNADDKF DPEKHIDDYL PVRVNEQRVS NLLQSILVGA SVFSMPIIRR IPTSVLWGYF AYMAIDSLPG
501: NQFWERMLLL FITPARRYKV LEGVHASFVE SVPFKYIFMF TLFQFVYLLV CFGVTWIPIA GILFPLPFFL LIIIRQHVLP KLFHPHDLQE LDAAEYEEIA
601: GVWSHSRTFK FKDLEPTHSG HKEGEVEICD AEILDELTTS RGELKLRSLS CPADWISQVH PKKDEEHNDR DTNEA

Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)

001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.