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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G023480.4 Barley plasma membrane 100.0 100.0
TraesCS3A01G126300.1 Wheat golgi 95.05 95.05
TraesCS3B01G145500.3 Wheat plasma membrane 95.2 93.93
HORVU4Hr1G081330.4 Barley plasma membrane 87.84 86.92
TraesCS3D01G127300.4 Wheat plasma membrane 91.74 86.18
Os01t0175700-01 Rice plasma membrane 83.78 83.04
Os01t0175600-01 Rice plasma membrane 82.58 81.85
OQU86222 Sorghum plasma membrane 80.03 80.39
Zm00001d039647_P001 Maize plasma membrane 80.48 80.0
HORVU0Hr1G032340.2 Barley plasma membrane 60.66 79.68
GSMUA_Achr2P19680_001 Banana plasma membrane 70.27 70.38
KRH09786 Soybean plasma membrane 69.37 69.06
PGSC0003DMT400014548 Potato plasma membrane 68.62 67.9
PGSC0003DMT400074816 Potato plasma membrane 66.82 67.84
VIT_11s0016g04740.t01 Wine grape plasma membrane 68.32 67.41
KRH23534 Soybean plasma membrane 62.46 67.31
GSMUA_Achr5P06140_001 Banana plasma membrane 66.97 66.87
VIT_04s0008g04980.t01 Wine grape plasma membrane 66.97 66.67
CDY39649 Canola plasma membrane 67.42 66.52
Solyc03g120020.2.1 Tomato plasma membrane 69.07 65.9
AT1G15460.1 Thale cress cytosol, golgi, peroxisome 67.12 65.45
VIT_09s0002g05810.t01 Wine grape plasma membrane 67.27 65.21
PGSC0003DMT400073484 Potato mitochondrion, plasma membrane 50.6 64.81
KRH61813 Soybean plasma membrane 63.81 64.2
KRH52492 Soybean plasma membrane 62.91 63.97
CDX88179 Canola plasma membrane 64.41 63.84
CDY68117 Canola plasma membrane 65.47 63.84
Bra008167.1-P Field mustard plasma membrane 65.47 63.84
Bra009840.1-P Field mustard plasma membrane 63.36 63.75
CDY37274 Canola plasma membrane 65.32 63.69
CDX80510 Canola plasma membrane 63.96 63.49
Bra037053.1-P Field mustard plasma membrane 62.76 63.43
CDY13492 Canola plasma membrane 62.61 63.18
CDX72362 Canola plasma membrane 62.61 63.09
CDX68852 Canola plasma membrane 63.06 62.69
AT1G74810.4 Thale cress plasma membrane 64.26 62.66
AT5G25430.1 Thale cress golgi, peroxisome, plasma membrane 62.61 62.15
AT4G32510.2 Thale cress plasma membrane 62.91 62.07
KRH05103 Soybean plasma membrane 61.56 61.84
CDY46028 Canola cytosol, golgi, plasma membrane 48.35 60.41
HORVU1Hr1G025890.7 Barley plastid 70.12 59.57
Solyc08g066960.2.1 Tomato plasma membrane 65.92 53.93
Solyc06g067900.1.1 Tomato golgi 28.08 53.58
HORVU5Hr1G022140.1 Barley cytosol, golgi, plasma membrane 54.05 50.56
CDX75250 Canola plastid 62.91 34.49
Bra026129.1-P Field mustard plasma membrane 67.42 28.62
CDY36563 Canola plasma membrane 67.12 28.45
CDX68853 Canola plastid 0.3 0.38
Protein Annotations
EnsemblPlants:HORVU3Hr1G023560.1EnsemblPlantsGene:HORVU3Hr1G023560GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575
GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0015698GO:GO:0016020GO:GO:0016021
InterPro:HCO3_transpt_CInterPro:HCO3_transpt_eukPANTHER:PTHR11453PANTHER:PTHR11453:SF40PFAM:PF00955TMHMM:TMhelix
UniParc:UPI000B47F0EEUniProt:A0A287KFH7MapMan:24.2.3.6:::
Description
No Description!
Coordinates
chrchr3H:-:86755239..86759318
Molecular Weight (calculated)
74296.5 Da
IEP (calculated)
6.286
GRAVY (calculated)
0.194
Length
666 amino acids
Sequence
(BLAST)
001: MDLLGNPFKG VVADVKGRAS WYKDDWVAGL RTGFRILAPT MYIFFASALP VISFGEQLSN ETDGIVSTVE TLASTAICGI IHSILGGQPL LIVGVAEPTI
101: IMYTYLYKFA KKQPDLGERL YLAWAGWVCI WTAIMLFLLA MFNASNVISR FTRVAGELFG MLITVLFLQQ AIKGIVSEFS VPKDDEISDP SSPIYQFQWI
201: YVNGLLGVIF SIGLLYTALK TRRARSWLYG VGWLRSFIAD YGVPLMVIVW TALSFTLPSK VPSGVPRRLF SPLPWESISL RHWTVAKDLF SVPPTYIFAA
301: IVPALMVAGL YFFDHSVASQ LAQQKEFNLK KASAYHYDIL VLGFMVLLCG LLGIPPSNGV LPQSPMHTRS LAVLKGQLLR RKMLQTAKEG MSNRASSLEI
401: YGKMQEVFIQ MDSNQNANSV DKDLKSLKDA VLREGDEEGK LAGEFDPSKH IEAHLPVRVN EQRLSNLLQS LLVGGCVGAM PAIKMIPTSV LWGYFAYMAI
501: DSLPGNQFWE RLQLLCIGAS RRYKVLEGPH ASFVEAVPSR TISAFTVFQF VYLLICFGIT WIPVAGILFP LPFFIMILIR QHLLPKFFEP NDLRELDAAE
601: YEELEGVPHE QTLEEDGSNS GSHDSIDDAE MLDELTTNRG ELKHRSASHP EERHLQVNDG SSQQIE
Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)
001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.