Factsheet for PGSC0003DMT400014548

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g120020.2.1	Tomato	plasma membrane	95.99	92.55
PGSC0003DMT400073484	Potato	mitochondrion, plasma membrane	61.37	79.42
KRH09786	Soybean	plasma membrane	75.48	75.93
KRH23534	Soybean	plasma membrane	68.05	74.11
VIT_09s0002g05810.t01	Wine grape	plasma membrane	75.63	74.09
GSMUA_Achr2P19680_001	Banana	plasma membrane	72.51	73.38
PGSC0003DMT400074816	Potato	plasma membrane	68.5	70.27
GSMUA_Achr5P06140_001	Banana	plasma membrane	69.39	70.02
TraesCS3A01G126300.1	Wheat	golgi	68.05	68.77
HORVU3Hr1G023480.4	Barley	plasma membrane	67.9	68.62
HORVU3Hr1G023560.1	Barley	plasma membrane	67.9	68.62
TraesCS3B01G145500.3	Wheat	plasma membrane	68.35	68.15
TraesCS4B01G330000.1	Wheat	plasma membrane	67.01	67.62
TraesCS7B01G475400.1	Wheat	plasma membrane	66.12	67.42
TraesCS4D01G326900.1	Wheat	plasma membrane	66.57	67.27
TraesCS5A01G501500.1	Wheat	plasma membrane	66.57	67.17
HORVU4Hr1G081330.4	Barley	plasma membrane	67.16	67.16
OQU86222	Sorghum	plasma membrane	66.12	67.12
Os01t0175700-01	Rice	plasma membrane	67.01	67.11
Os01t0175600-01	Rice	plasma membrane	66.57	66.67
Zm00001d039647_P001	Maize	plasma membrane	66.27	66.57
Os05t0176800-01	Rice	plasma membrane	65.38	64.99
HORVU0Hr1G032340.2	Barley	plasma membrane	48.89	64.89
TraesCS3D01G127300.4	Wheat	plasma membrane	67.01	63.61
KXG21448	Sorghum	plasma membrane	63.45	62.15
Zm00001d009789_P006	Maize	plasma membrane	63.6	61.32
Zm00001d042982_P001	Maize	plasma membrane	57.36	58.4
TraesCS1B01G137300.2	Wheat	mitochondrion, plasma membrane	63.45	56.71
TraesCS1D01G118600.2	Wheat	plasma membrane	63.3	55.54
TraesCS1A01G117500.3	Wheat	plasma membrane	63.15	55.27
PGSC0003DMT400069678	Potato	plasma membrane	57.95	54.55
HORVU1Hr1G025890.7	Barley	plastid	63.3	54.34
PGSC0003DMT400013372	Potato	plasma membrane	57.95	54.17
PGSC0003DMT400046121	Potato	plasma membrane	55.72	52.59
Zm00001d048447_P002	Maize	cytosol	49.18	38.13

Protein Annotations

EntrezGene:102601556	MapMan:24.2.3.6	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452
GO:GO:0005575	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0015698	GO:GO:0016020
GO:GO:0016021	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	UniProt:M1A4F7	PFAM:PF00955	EnsemblPlantsGene:PGSC0003DMG400005695
PGSC:PGSC0003DMG400005695	EnsemblPlants:PGSC0003DMT400014548	PANTHER:PTHR11453	PANTHER:PTHR11453:SF48	TMHMM:TMhelix	UniParc:UPI000296453C
RefSeq:XP_006341714.1	SEG:seg	:	:	:	:

Description

Boron transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400005695]

Coordinates

chr3:+:59425905..59430777

Molecular Weight (calculated)

75085.0 Da

IEP (calculated)

7.610

GRAVY (calculated)

0.273

Length

673 amino acids

Sequence
(BLAST)

001: MKSLPGAPFK GISEDIRGRV SCYKQDWIAG IRSGIGILAP TTYIFFASAL PVIAFGEQLS RETDGSLSTV ETLASTAICG IIHSILGGQP LMILGVAEPT
101: IIMYSYLYKF AKGREELGQT LYLAWAGWVC VWTALMLFLL AIFNACSIIS KFTRIAGETF GMLIAVLFIQ EAIKGLVSEF SIPKAEDPSS EKYQFHWLYT
201: NGLLGIIFTF GLLYTALKSR KARSWWYGTG WIRSFIADYG VPLMVLMWSA LSFIVPSNVP SGVPRTLYSP LPWESASLYH WTVIKDMVKV PPVYIFAAII
301: PAVMIAGLYF FDHSVASQMA QQKEFNLKNP SAYHYDILLL GFMTLLCGLL GLPPSNGVLP QSPMHTKSLA ILKKQLIRKK MVESAKESIR RKASNSEIYG
401: NMQAVFIEID SSPISAVAKE LEHLKEAIMK GESENANGEK SNGIFDPEKY IDAYLPVRVN EQRVSNLLQS LLVAASVGAM PVIKKIPTSV LWGYFAYMAI
501: DSLPGNQLWE RTLLLFVAPG RRFKVLEGVH ASFVESVPFR YIAIFTIFQF MYLLLVFGVT WIPIAGILFP LPFFLLISIR QHLLPKLLHP RHLQELDAAE
601: YEEIAGAPQR ALSISFRETE TTLPRTEGAI EICDAEILDE LTTSRGEFKV RTVSFSEDKR PQVIHPTADT ESE

Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)

001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.