Factsheet for Solyc03g120020.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 7
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014548	Potato	plasma membrane	92.55	95.99
KRH09786	Soybean	plasma membrane	72.06	75.19
VIT_09s0002g05810.t01	Wine grape	plasma membrane	72.64	73.8
KRH23534	Soybean	plasma membrane	64.9	73.3
GSMUA_Achr2P19680_001	Banana	plasma membrane	69.63	73.08
GSMUA_Achr5P06140_001	Banana	plasma membrane	67.19	70.31
HORVU3Hr1G023480.4	Barley	plasma membrane	65.9	69.07
HORVU3Hr1G023560.1	Barley	plasma membrane	65.9	69.07
TraesCS3A01G126300.1	Wheat	golgi	65.47	68.62
TraesCS3B01G145500.3	Wheat	plasma membrane	66.19	68.44
TraesCS7B01G475400.1	Wheat	plasma membrane	64.18	67.88
TraesCS4B01G330000.1	Wheat	plasma membrane	64.61	67.62
TraesCS4D01G326900.1	Wheat	plasma membrane	64.33	67.42
Os01t0175700-01	Rice	plasma membrane	64.9	67.41
TraesCS5A01G501500.1	Wheat	plasma membrane	64.04	67.02
Zm00001d039647_P001	Maize	plasma membrane	64.33	67.01
HORVU4Hr1G081330.4	Barley	plasma membrane	64.61	67.01
OQU86222	Sorghum	plasma membrane	63.47	66.82
Os01t0175600-01	Rice	plasma membrane	64.33	66.82
Solyc06g067900.1.1	Tomato	golgi	32.81	65.62
HORVU0Hr1G032340.2	Barley	plasma membrane	47.28	65.09
Os05t0176800-01	Rice	plasma membrane	63.04	64.99
TraesCS3D01G127300.4	Wheat	plasma membrane	65.04	64.03
KXG21448	Sorghum	plasma membrane	60.6	61.57
Zm00001d009789_P006	Maize	plasma membrane	60.74	60.74
Zm00001d042982_P001	Maize	plasma membrane	55.16	58.25
TraesCS1B01G137300.2	Wheat	mitochondrion, plasma membrane	61.32	56.84
Solyc08g066960.2.1	Tomato	plasma membrane	66.19	56.76
TraesCS1D01G118600.2	Wheat	plasma membrane	60.74	55.28
TraesCS1A01G117500.3	Wheat	plasma membrane	60.89	55.27
HORVU1Hr1G025890.7	Barley	plastid	60.6	53.95
Solyc06g071500.2.1	Tomato	plasma membrane	55.44	53.75
Solyc01g079150.2.1	Tomato	plasma membrane	55.44	53.75
Solyc01g057770.2.1	Tomato	plasma membrane	53.44	52.31
Zm00001d048447_P002	Maize	cytosol	47.28	38.02

Protein Annotations

MapMan:24.2.3.6	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150
GO:GO:0008509	GO:GO:0009987	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725
GO:GO:0051453	GO:GO:0098656	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	UniProt:K4BMF1	PFAM:PF00955
PANTHER:PTHR11453	PANTHER:PTHR11453:SF40	EnsemblPlantsGene:Solyc03g120020.2	EnsemblPlants:Solyc03g120020.2.1	TMHMM:TMhelix	UniParc:UPI00027669A3
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:68533803..68538817

Molecular Weight (calculated)

78353.3 Da

IEP (calculated)

6.735

GRAVY (calculated)

0.289

Length

698 amino acids

Sequence
(BLAST)

001: MDKVPYIYMP CVVMQMTMIL ELELNMKSRL GVPFKGISED IRGRVSCYKQ DWIAGIRSGI GILAPTTYIF FASALPVIAF GEQLSRETDG SLSTVETLAS
101: TAICGIIHSI LGGQPLMILG VAEPTIIMYS YLYKFAKGRE DLGQTLYLAW AGWVCVWTAL MLFLLAIFNA CSVISKFTRI AGETFGMLIA VLFIQEAIKG
201: LVSEFSIPKA EDPSSEKYQF HWLYMNGLLG IIFTFGLLYT ALKSRKARSW WYGTGWMRSF IADYGVPLMV LMWSSLSFIV PSNVPSGVPR TLYSPLPWES
301: ASLYHWTVMK DMVKVPPVYI FAAIIPAVMI AGLYFFDHSV ASQMAQQKEF NLKNPSAYHY DILLLGFMTL LCGLLGLPPS NGVLPQSPMH TKSLAILKKQ
401: LIRKKMVESA KESIRQKASN SEIYGNMQAV FIEIDSSPIS AVAKELEHLK EAIMKCESDN ANDEKSSGIF DPEKYIDAYL PVRVNEQRVS NLLQSLLVAA
501: SAGAMPVIKK IPTSVLWGYF AYMAIDSLPG NQLWERMLLL FISPGRRFKV LEGVHASFVE SVPFRCIAIF TIFQFVYLLV VFGVTWIPIA GILFPLPFFL
601: LISIRQHLLP KFLHPRHLQE LDAAEYEEIA GAPQRALSFS FRETEITLPR TEGEIEICDA EILDELTTSR GEFKVRTISF SEDKRPQVIY PTADTESE

Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)

001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.