Factsheet for TraesCS1B01G137300.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 4
peroxisome 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G117500.3	Wheat	plasma membrane	98.27	96.23
TraesCS1D01G118600.2	Wheat	plasma membrane	97.88	96.09
Os05t0176800-01	Rice	plasma membrane	73.44	81.68
HORVU1Hr1G025890.7	Barley	plastid	84.73	81.38
KXG21448	Sorghum	plasma membrane	72.11	79.04
Zm00001d009789_P006	Maize	plasma membrane	70.52	76.07
Zm00001d042982_P001	Maize	plasma membrane	64.28	73.22
TraesCS3B01G145500.3	Wheat	plasma membrane	61.22	68.3
TraesCS4B01G330000.1	Wheat	plasma membrane	60.29	68.07
GSMUA_Achr2P19680_001	Banana	plasma membrane	60.03	67.97
TraesCS7B01G475400.1	Wheat	plasma membrane	59.5	67.88
KRH09786	Soybean	plasma membrane	56.57	63.68
PGSC0003DMT400074816	Potato	plasma membrane	55.38	63.57
PGSC0003DMT400014548	Potato	plasma membrane	56.71	63.45
GSMUA_Achr5P06140_001	Banana	plasma membrane	56.18	63.42
KRH23534	Soybean	plasma membrane	51.53	62.78
VIT_11s0016g04740.t01	Wine grape	plasma membrane	56.04	62.52
KRH61813	Soybean	plasma membrane	54.85	62.39
Bra037053.1-P	Field mustard	plasma membrane	54.58	62.37
KRH52492	Soybean	plasma membrane	54.18	62.29
VIT_04s0008g04980.t01	Wine grape	plasma membrane	55.25	62.18
CDY13492	Canola	plasma membrane	54.45	62.12
CDX72362	Canola	plasma membrane	54.45	62.03
VIT_09s0002g05810.t01	Wine grape	plasma membrane	56.57	62.01
CDY39649	Canola	plasma membrane	55.25	61.63
CDX68852	Canola	plasma membrane	54.71	61.49
Solyc03g120020.2.1	Tomato	plasma membrane	56.84	61.32
CDY37274	Canola	plasma membrane	55.11	60.76
Bra008167.1-P	Field mustard	plasma membrane	54.98	60.61
CDY68117	Canola	plasma membrane	54.85	60.47
AT4G32510.2	Thale cress	plasma membrane	54.18	60.44
KRH05103	Soybean	plasma membrane	53.12	60.33
AT1G15460.1	Thale cress	cytosol, golgi, peroxisome	54.58	60.18
AT5G25430.1	Thale cress	golgi, peroxisome, plasma membrane	53.52	60.06
CDX80510	Canola	plasma membrane	53.12	59.61
AT1G74810.4	Thale cress	plasma membrane	54.05	59.59
CDX88179	Canola	plasma membrane	53.12	59.52
Bra009840.1-P	Field mustard	plasma membrane	52.32	59.52
PGSC0003DMT400073484	Potato	mitochondrion, plasma membrane	40.64	58.85
CDY46028	Canola	cytosol, golgi, plasma membrane	40.11	56.66
Solyc08g066960.2.1	Tomato	plasma membrane	56.57	52.33
TraesCS5B01G091200.1	Wheat	plasma membrane	47.28	50.0
Solyc06g067900.1.1	Tomato	golgi	22.44	48.42
Zm00001d048447_P002	Maize	cytosol	53.92	46.77
CDX75250	Canola	plastid	56.71	35.14
Bra026129.1-P	Field mustard	plasma membrane	55.38	26.58
CDY36563	Canola	plasma membrane	55.11	26.42
CDX68853	Canola	plastid	2.12	3.02

Protein Annotations

EnsemblPlants:TraesCS1B01G137300.2	EnsemblPlantsGene:TraesCS1B01G137300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575
GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_euk	PANTHER:PTHR11453	PANTHER:PTHR11453:SF31	PFAM:PF00955	SEG:seg	TMHMM:TMhelix
MapMan:24.2.3.6	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:175415833..175421481

Molecular Weight (calculated)

84188.2 Da

IEP (calculated)

9.099

GRAVY (calculated)

0.134

Length

753 amino acids

Sequence
(BLAST)

001: MGGKERRLQP RPAPAPARLL RLPTPGFAPC VAGGGGIAVA LRRISGATLR LASPTPPRPG TPLLSPFQAM EPKKTLFKGV IEDFRGRASC YKQDWHNGFS
101: SGFRILAPTL YIFFASALPV IAFGEQLSKD TDGTLTTVET LASTAICGII HSVLGGQPLL IVGVAEPTII MYTYLYSFAK NQPNLGERLF LAWAGWVCIW
201: TAVMLFLMAM FNAAAALNRF TRFAGELFGM LITILFMQEA IKGMLSEFSV PEGKDQSLPI YQFQWVYING LLGIIFSMGL LYTALKSRSA RSSLYGAGWL
301: RNVIADYGVP LMVILWTTLS YSLPTKIPSG VPRRLFTPLP WEPKSLQHWT VAKELFSVPL AYILLAIVPA VMVAGLYFFD HSVASQMAQQ KEFNLKNPSA
401: YHYDILVLSF SVLICGLLGI PPSNGVLPQA PMHTRSLAVL RRQALRKQMV RTAKEGMMNN ASSSEVYGKM HEVFIKMDDK GNEDSAHKEL KELKDAIITE
501: GKKITEGNGA VTAPEVFDPE KHLEAYLPVR VNEQRVSNLL QSLLVAGCIG VVPVIQKIPT SVLWGYFGYM SIDSLPGNQF WERLQLLFIS PRRRYKVLEG
601: AHASFLESVP FNQILAFTVF QLIYLLMVWG MTWIPVAGIL FPLLFFFLII IREHLLPKFF DTRHLWELDA SEYEECEGVH RDPSIPEGDG ESITRGIEDP
701: SEYTAEVMEE FTTHRGELKH RAPSFRDERL IRLNSVQMTR QFSRISSFAP TRP

Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)

001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.