Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68852 Canola plasma membrane 54.32 98.51
CDX68853 Canola plastid 42.72 98.11
CDX72362 Canola plasma membrane 51.52 94.7
CDY13492 Canola plasma membrane 51.44 94.7
AT4G32510.2 Thale cress plasma membrane 50.53 90.96
PGSC0003DMT400074816 Potato plasma membrane 36.54 67.68
KRH52492 Soybean plasma membrane 36.46 67.63
KRH61813 Soybean plasma membrane 36.63 67.22
VIT_04s0008g04980.t01 Wine grape plasma membrane 36.79 66.82
CDX88179 Canola plasma membrane 36.95 66.82
CDX80510 Canola plasma membrane 36.71 66.47
KRH05103 Soybean plasma membrane 35.8 65.61
CDY39649 Canola plasma membrane 35.88 64.59
GSMUA_Achr2P19680_001 Banana plasma membrane 34.9 63.76
Os01t0175700-01 Rice plasma membrane 34.9 63.1
HORVU3Hr1G023480.4 Barley plasma membrane 34.49 62.91
HORVU3Hr1G023560.1 Barley plasma membrane 34.49 62.91
OQU86222 Sorghum plasma membrane 34.32 62.9
Os01t0175600-01 Rice plasma membrane 34.65 62.65
CDY68117 Canola plasma membrane 35.14 62.52
CDY37274 Canola plasma membrane 35.14 62.52
TraesCS3A01G126300.1 Wheat golgi 34.16 62.31
Os05t0176800-01 Rice plasma membrane 34.57 62.04
Zm00001d039647_P001 Maize plasma membrane 34.16 61.94
TraesCS3B01G145500.3 Wheat plasma membrane 34.4 61.93
GSMUA_Achr5P06140_001 Banana plasma membrane 33.99 61.92
TraesCS4B01G330000.1 Wheat plasma membrane 33.91 61.77
TraesCS4D01G326900.1 Wheat plasma membrane 33.74 61.56
TraesCS5A01G501500.1 Wheat plasma membrane 33.74 61.47
HORVU4Hr1G081330.4 Barley plasma membrane 33.99 61.37
TraesCS7B01G475400.1 Wheat plasma membrane 33.33 61.36
Solyc08g066960.2.1 Tomato plasma membrane 40.16 59.95
CDY46028 Canola cytosol, golgi, plasma membrane 26.09 59.47
KXG21448 Sorghum plasma membrane 33.42 59.1
HORVU0Hr1G032340.2 Barley plasma membrane 24.44 58.58
Zm00001d009789_P006 Maize plasma membrane 33.33 58.02
TraesCS3D01G127300.4 Wheat plasma membrane 33.42 57.26
TraesCS1B01G137300.2 Wheat mitochondrion, plasma membrane 35.14 56.71
Zm00001d042982_P001 Maize plasma membrane 30.7 56.43
TraesCS1A01G117500.3 Wheat plasma membrane 35.56 56.18
TraesCS1D01G118600.2 Wheat plasma membrane 35.23 55.8
HORVU1Hr1G025890.7 Barley plastid 34.32 53.19
CDX93980 Canola plasma membrane 30.21 51.98
CDY37790 Canola plasma membrane 29.88 51.56
CDY51414 Canola plasma membrane 29.71 51.42
CDY27507 Canola plasma membrane 29.71 51.42
CDX80082 Canola plasma membrane 29.79 51.42
CDY50920 Canola plasma membrane 29.71 51.28
CDX83341 Canola plasma membrane 29.63 51.14
CDX74103 Canola plasma membrane 28.4 46.75
CDY08050 Canola plasma membrane 28.31 46.68
CDY69873 Canola golgi, plasma membrane 18.52 45.92
CDY37788 Canola cytosol 4.03 40.16
Zm00001d048447_P002 Maize cytosol 27.74 38.82
CDY37789 Canola endoplasmic reticulum, golgi 6.34 34.53
CDY36563 Canola plasma membrane 35.97 27.82
Protein Annotations
KEGG:00260+2.1.2.1KEGG:00460+2.1.2.1KEGG:00630+2.1.2.1KEGG:00670+2.1.2.1KEGG:00680+2.1.2.1MapMan:1.3.5
MapMan:24.2.3.6Gene3D:3.40.640.10Gene3D:3.90.1150.10GO:A0A078CEE7EnsemblPlants:CDX75250ProteinID:CDX75250
ProteinID:CDX75250.1GO:GO:0003674GO:GO:0003824GO:GO:0004372GO:GO:0005215GO:GO:0005452
GO:GO:0005488GO:GO:0005575GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0019264
GO:GO:0030170GO:GO:0035999EnsemblPlantsGene:GSBRNA2T00121111001InterPro:HCO3_transpt_CInterPro:HCO3_transpt_eukInterPro:IPR015421
InterPro:IPR015422HAMAP:MF_00051PFAM:PF00464PFAM:PF00955ScanProsite:PS00096PANTHER:PTHR11453
PANTHER:PTHR11453:SF40MetaCyc:PWY-1622MetaCyc:PWY-181MetaCyc:PWY-2161MetaCyc:PWY-2201MetaCyc:PWY-3661
MetaCyc:PWY-3661-1MetaCyc:PWY-3841MetaCyc:PWY-5497InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383InterPro:Ser_HO-MeTrfaseInterPro:Ser_HO-MeTrfase_PLP_BSTMHMM:TMhelixUniPathway:UPA00193UniPathway:UPA00288
UniParc:UPI0004EDDA71SEG:seg::::
Description
BnaA01g04520D
Coordinates
chrLK031804:-:301182..308208
Molecular Weight (calculated)
134731.0 Da
IEP (calculated)
7.862
GRAVY (calculated)
0.047
Length
1215 amino acids
Sequence
(BLAST)
0001: MEACCGATSM GSLQQSGGVQ RPVFAPVMSP VNKFSQQLKF NFAGPNRSLF LKRSLVVERK ASSVSVPAVE TSNNEIPFED YGRSEVDPEV DEIIKKEKNR
0101: QFRSLELIAS ENFTSRAVME TVGSCLTNKY SEGLPGKRYY GGNEFIDQLE TLCQNRALAT FRLDSTKWGV NVQPLSGSPA NFAVYTAILK PHDRIMGLDL
0201: PHGGHLSHGF MTAKRRVSGT SIYFESMPYR LDESTGIVDY DMLEKTAVLF RPKLIIAGAS AYSRDFDYPR MRKIADSVGA FLMMDMAHIS GLVAASVVAD
0301: PFEYCDIVTT TTHKSLRGPR GGMIFFKKDP VNGVELESAI NNAVFPGLQG GPHNHTIGGL AVCLKHAQSP EFKAYQKRVV ANCKALANRL VELGFDLVSG
0401: GSDNHLVLVD LRPLGMDGAR VEKILDMASI TLNKNSVPGD KSALVPGGIR IGTPAMTTRG LTEKDFVVVA DLIKEGVEIT MEAKKLVSGT KLGEFTKLVT
0501: SPDFPLREKV ESLKERVESF TSRFPIPGET AISREPSLIP EGSAMEGANT PFAGIINDFN GRRKCYKQDW LAAFNSGVRI LAPTLYIFIA SALPVIAFGE
0601: QLSRETDRSL GIAESLASTA ICGIIHSIFG GQPLLIVGVA EPTIIMYTYL HSFSKGRPEL GQKLYLAWAG WVCVWTAVLL ILLATLNAAN IISRFTRIAG
0701: ELFGMLITVL FFQEAVKGLL GEFLVPKSED PSLEAYQSHW RYTNGLLAVI FSFGLLYTAL KSRRARSWRY GFRWMRGFIG DYGTLLMLVL WSALSFTVPR
0801: DIPEGVPRRL ELPLPWDSES LYHWTVVKDM GKVPPLYILA AFIPAIMIAG LYFFDHCVSA QMAQQKEFNL KNPSAYHYDI FILGIMTLIC GLLGLPPSNG
0901: VIPQSPMHTK SLAVLKRQQM RKKMVQKAKE CMKAKASNSE IYGKMQDVFI EMETSPKATS VVKELENLKE AVMKADGGGG GDTKGKKFDP EVLIEDHLPV
1001: RVNEQRVSNL LQSILVGLLI FVVPLLRMIP TSVLWGYFTY MAVDSLPGNQ FWERLLLLFI TPGRRFKVLE GLHASFMEIV PYKSIVMFTL FQLLYFLICY
1101: GVTWIPVGGI LFPLPFFFLI ALRQYILPKI FDPSHLQVLD SSEYEEMVGA THSSFGINGE PHNLPMSSVE ISEDDFYDAE ILDEITTSRG ELKHRTLSAR
1201: EGTSHMVYPE NSGHS
Best Arabidopsis Sequence Match ( AT4G32510.2 )
(BLAST)
001: MEGVKFPFGG IINDFNGRRK CYKQDWLAAF NSGVRILAPT LYIFIASALP VIAFGEQLSR ETDRSLGIAE SLASTALCGI IHSVFGGQPL LIVGVAEPTI
101: IMYTYLHSFS KSRPELGQKL YLAWAGWVCV WTAVLLMLLA MLNACNIISR FTRIAGELFG MLITVLFIQE AVKGLIGEFL VPKSDDPSLE VYQFQWRYTN
201: GLLAVIFSFG LLYTALKSRR ARSWKYGFRW MRGFIGDYGT LLMLVLWSAF SYTVPRNLPE GVPRRLELPL PWASESLYHW TVVKDMAKVP PLYILAAFIP
301: AIMIAGLYFF DHCVSAQMAQ QKEFNLKNPT AYHYDIFILG IMTLICGLLG LPPSNGVIPQ SPMHTKSLAV LKKQQMRKKM VQKAKECMRE KASNSEIYGR
401: MQDVFIEMET SPKATSVVKE LENLKEAVMK ADDGGGETKG KKFDPEVHIE DHLPVRVNEQ RVSNLLQSVL VGLLILAVPV LRMIPTSVLW GYFTYMAVDS
501: LPGNQFWERL QLLFITPGRR FKVLEGLHAS FVEIVPYKSI VMFTLFQLLY FLICYGVTWI PVGGILFPLP FFILIALRQY ILQRLFDPSH LQVLDSSEYE
601: EMVGAPQRNS SFGFNGELRE AHNIPLSVVE NSEDEFYDAE ILDEITTSRG ELKHRTLSVK EDRSQMVYPE NSGHS
Arabidopsis Description
HCO3- transporter family [Source:TAIR;Acc:AT4G32510]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.