CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G15460.1	Thale cress	cytosol, golgi, peroxisome	91.26	90.19
CDY68117	Canola	plasma membrane	85.78	84.77
CDY37274	Canola	plasma membrane	85.63	84.63
CDY46028	Canola	cytosol, golgi, plasma membrane	64.15	81.24
GSMUA_Achr2P19680_001	Banana	plasma membrane	66.96	67.97
HORVU3Hr1G023560.1	Barley	plasma membrane	66.52	67.42
HORVU3Hr1G023480.4	Barley	plasma membrane	66.52	67.42
TraesCS3A01G126300.1	Wheat	golgi	65.93	66.82
CDX72362	Canola	plasma membrane	64.74	66.11
CDY13492	Canola	plasma membrane	64.59	66.06
TraesCS4D01G326900.1	Wheat	plasma membrane	65.04	65.92
OQU86222	Sorghum	plasma membrane	64.74	65.91
GSMUA_Achr5P06140_001	Banana	plasma membrane	65.04	65.82
TraesCS3B01G145500.3	Wheat	plasma membrane	65.78	65.78
Zm00001d039647_P001	Maize	plasma membrane	65.19	65.67
TraesCS4B01G330000.1	Wheat	plasma membrane	64.89	65.67
TraesCS5A01G501500.1	Wheat	plasma membrane	64.74	65.52
Os05t0176800-01	Rice	plasma membrane	65.63	65.44
CDX68852	Canola	plasma membrane	64.89	65.37
HORVU4Hr1G081330.4	Barley	plasma membrane	65.04	65.23
TraesCS7B01G475400.1	Wheat	plasma membrane	63.7	65.15
Os01t0175600-01	Rice	plasma membrane	64.59	64.88
Os01t0175700-01	Rice	plasma membrane	64.44	64.73
CDX88179	Canola	plasma membrane	64.3	64.58
CDX80510	Canola	plasma membrane	63.85	64.23
HORVU0Hr1G032340.2	Barley	plasma membrane	47.56	63.31
KXG21448	Sorghum	plasma membrane	62.96	61.86
TraesCS3D01G127300.4	Wheat	plasma membrane	64.44	61.35
Zm00001d009789_P006	Maize	plasma membrane	62.52	60.46
Zm00001d042982_P001	Maize	plasma membrane	56.74	57.94
CDY37790	Canola	plasma membrane	58.67	56.25
CDX80082	Canola	plasma membrane	58.52	56.11
CDY51414	Canola	plasma membrane	58.07	55.84
CDY27507	Canola	plasma membrane	58.07	55.84
CDY50920	Canola	plasma membrane	58.22	55.82
CDX93980	Canola	plasma membrane	58.37	55.81
CDX83341	Canola	plasma membrane	58.07	55.68
TraesCS1B01G137300.2	Wheat	mitochondrion, plasma membrane	61.63	55.25
TraesCS1D01G118600.2	Wheat	plasma membrane	62.22	54.76
TraesCS1A01G117500.3	Wheat	plasma membrane	62.07	54.49
HORVU1Hr1G025890.7	Barley	plastid	63.11	54.34
CDX74103	Canola	plasma membrane	55.56	50.81
CDY08050	Canola	plasma membrane	55.26	50.61
CDY69873	Canola	golgi, plasma membrane	36.3	50.0
CDY36563	Canola	plasma membrane	98.81	42.46
CDY37788	Canola	cytosol	6.96	38.52
Zm00001d048447_P002	Maize	cytosol	48.74	37.9
CDX75250	Canola	plastid	64.59	35.88
CDY37789	Canola	endoplasmic reticulum, golgi	10.81	32.74
CDX68853	Canola	plastid	0.15	0.19

Protein Annotations

MapMan:24.2.3.6	GO:A0A078HQP1	UniProt:A0A078HQP1	EnsemblPlants:CDY39649	ProteinID:CDY39649	ProteinID:CDY39649.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006820	GO:GO:0007154	GO:GO:0008150	GO:GO:0009605	GO:GO:0009987
GO:GO:0009991	GO:GO:0016020	GO:GO:0016021	GO:GO:0035445	GO:GO:0046713	GO:GO:0080029
GO:GO:0080139	EnsemblPlantsGene:GSBRNA2T00068220001	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	PFAM:PF00955	PANTHER:PTHR11453
PANTHER:PTHR11453:SF48	TMHMM:TMhelix	UniParc:UPI0004EEE84B	SEG:seg	:	:

Description

BnaC05g11780DBoron transporter 4 [Source:Projected from Arabidopsis thaliana (AT1G15460) UniProtKB/Swiss-Prot;Acc:Q9XI23]

Coordinates

chrLK032453:-:242641..245696

Molecular Weight (calculated)

75982.1 Da

IEP (calculated)

7.881

GRAVY (calculated)

0.117

Length

675 amino acids

Sequence
(BLAST)

001: MEKEISSKRP FRGIIADLKG RALCYKQDWI TGLRSGFGIL APTTYIFFAS ALPVIAFGEQ LSRDTDGALS TVETLASTAL CGVIHSILGG QPLLILGVAE
101: PTVLMYVYLY NFAKGRPELG KELYLAWVAW VCVWTAMLLF MMAILNAADI INRFTRVAGE LFGMLISVLF IQQAIKGMVS EFSMPKEGDS QLEKYKFEWL
201: YTNGLLGLIF TFGLLYTALK SRKARSWRYG TGWYRSFIAD YGVPLMVVVW TALSFTTPSK LPSGVPRRLF SPLPWDSASL EHWTVIKDMG KVSPGYIFAA
301: FIPALMIAGL YFFDHSVASQ LAQQKEFNLK NPSAYHYDIL LLGFMTLICG LLGLPPSNGV LPQSPMHTKS LAVLKRQLIR RKMVKTAKES IRKRATSSEV
401: YENMQEVFIE MDKSPIAQTN RTVILELQDL KEAVMKSNED EGEREEESGF DPEKHLDAYL PVRVNEQRVS NLLQSLLVAG AVLAMPAIKL MPTSVLWGYF
501: AYMAIDSLPG NQFFERMMLL FVLPSRRFKV LEGAHASFVE KVPYKSMAAF TILQIVYFGI CYGVTWIPVA GIMFPVPFFL LIAIRQYILP KLFNPSHLRE
601: LDAAEYEEIP GTPRDPLELS FRATDTTKGV PENDAEILDE LTTRRGELKV RTLSLNEDKG NQIYPKEKVQ AEDET

Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)

001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.