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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000442.1-P Field mustard plasma membrane 99.15 99.29
CDY50920 Canola plasma membrane 98.58 98.58
CDX80082 Canola plasma membrane 96.31 96.31
CDY37790 Canola plasma membrane 96.31 96.31
CDY51414 Canola plasma membrane 95.6 95.87
CDY27507 Canola plasma membrane 95.31 95.58
AT2G47160.2 Thale cress plasma membrane 95.88 92.59
CDX93980 Canola plasma membrane 90.91 90.65
CDY69873 Canola golgi, plasma membrane 60.94 87.55
VIT_07s0005g02060.t01 Wine grape plasma membrane 81.82 80.33
KXG23716 Sorghum plasma membrane 78.69 78.14
TraesCS5A01G085200.1 Wheat plasma membrane 78.41 77.53
PGSC0003DMT400013372 Potato plasma membrane 79.26 77.5
Solyc01g079150.2.1 Tomato plasma membrane 79.12 77.36
Os12t0566000-02 Rice plasma membrane 78.12 77.36
TraesCS5B01G091200.1 Wheat plasma membrane 77.98 77.11
TraesCS5D01G097600.1 Wheat plasma membrane 77.98 77.11
GSMUA_Achr3P12750_001 Banana plasma membrane 78.41 76.77
HORVU5Hr1G022140.1 Barley cytosol, golgi, plasma membrane 77.41 76.54
GSMUA_Achr3P24480_001 Banana golgi, peroxisome, plasma membrane 77.56 75.94
CDY37789 Canola endoplasmic reticulum, golgi 22.16 69.96
CDY37788 Canola cytosol 11.65 67.21
CDX74103 Canola plasma membrane 70.31 67.07
CDY08050 Canola plasma membrane 70.17 67.03
CDY39649 Canola plasma membrane 55.68 58.07
CDY68117 Canola plasma membrane 54.4 56.08
CDY37274 Canola plasma membrane 54.4 56.08
CDY13492 Canola plasma membrane 51.42 54.85
CDX72362 Canola plasma membrane 51.28 54.61
CDX88179 Canola plasma membrane 51.85 54.32
CDX80510 Canola plasma membrane 51.7 54.25
CDX68852 Canola plasma membrane 51.42 54.03
CDY46028 Canola cytosol, golgi, plasma membrane 38.35 50.66
Zm00001d010317_P001 Maize cytosol, golgi, plastid 11.65 46.33
CDX75250 Canola plastid 51.14 29.63
Zm00001d050809_P001 Maize cytosol 5.54 28.26
Zm00001d000089_P001 Maize cytosol 9.09 27.47
CDY36563 Canola plasma membrane 55.54 24.89
Zm00001d030297_P001 Maize plastid 17.05 23.39
CDX68853 Canola plastid 0.14 0.19
Protein Annotations
MapMan:24.2.3.6GO:A0A078D1T9EnsemblPlants:CDX83341ProteinID:CDX83341ProteinID:CDX83341.1GO:GO:0003674
GO:GO:0005215GO:GO:0005452GO:GO:0005575GO:GO:0006810GO:GO:0006820GO:GO:0008150
GO:GO:0015698GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00138903001InterPro:HCO3_transpt_CInterPro:HCO3_transpt_euk
PFAM:PF00955PANTHER:PTHR11453PANTHER:PTHR11453:SF51TMHMM:TMhelixUniParc:UPI0004EEBCD1SEG:seg
Description
BnaA03g21650D
Coordinates
chrLK031832:+:1116821..1120477
Molecular Weight (calculated)
78503.1 Da
IEP (calculated)
9.034
GRAVY (calculated)
0.177
Length
704 amino acids
Sequence
(BLAST)
001: MEETFVPFEG IKNDLKGRLT CYKQDWTGGF KAGFRILAPT TYIFFASAIP VISFGEQLER NTDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KARPELGRNL FLAWSGWVCV WTALMLFVMA ICGACSIINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR IPDRENQKLK EFLPSWRFAN
201: GMFALVLSFG LLLTGLRSRK ARSWRYGSAG WLRSLIADYG VPLMVLVWTG VSYIPAGDVP KGIPRRLFSP NPWSPGAYGN WTVVKEMLDV PIVHIIGAFV
301: PASMIAVLYY FDHSVASQLA QQKEFNLRKP SSYHYDLLLL GFLTLMCGLL GVPPSNGVIP QSPMHTKSLA TLKYQLLRNR LVATARRSIK TNASLGQLYN
401: NMQEAYHHMQ TPLVYQQPQG LKELKESTIQ ATTLTGNLNA PVDETLFDIE KEIDDLLPVE VKEQRVSNFL QSTMVGGCVA AMPILKMIPT SVLWGYFAFM
501: AIESLPGNQF WERILLLFTA PSRRFKVLED YHATFVETVP FKTIATFTIF QTIYLLVCFG LTWIPIAGVM FPLMIMFLIP VRQYILPRFF KGAHLQDLDA
601: AEYEEAPALP FNLAAETEIG STTSYPGDSE ILDEVITRSR GEFRHTSSPK VTSSNSTPVN SRSLSQVFSP RVGELRLGQM SPRVVGNSPK PPSTGRSPLN
701: QGSH
Best Arabidopsis Sequence Match ( AT2G47160.1 )
(BLAST)
001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGF KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGM IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KARPELGRDL FLAWSGWVCV WTALMLFVLA ICGACSIINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR IPERENQKLK EFLPSWRFAN
201: GMFALVLSFG LLLTGLRSRK ARSWRYGTGW LRSLIADYGV PLMVLVWTGV SYIPAGDVPK GIPRRLFSPN PWSPGAYGNW TVVKEMLDVP IVYIIGAFIP
301: ASMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG VPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARRSIKT NASLGQLYDN
401: MQEAYHHMQT PLVYQQPQGL KELKESTIQA TTFTGNLNAP VDETLFDIEK EIDDLLPVEV KEQRVSNLLQ STMVGGCVAA MPILKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDY HATFVETVPF KTIAMFTLFQ TTYLLICFGL TWIPIAGVMF PLMIMFLIPV RQYLLPRFFK GAHLQDLDAA
601: EYEEAPALPF NLAAETEIGS TTSYPGDLEI LDEVMTRSRG EFRHTSSPKV TSSSSTPVNN RSLSQVFSPR VSGIRLGQMS PRVVGNSPKP ASCGRSPLNQ
701: SSSN
Arabidopsis Description
BOR1HCO3-transporter family [Source:UniProtKB/TrEMBL;Acc:A8MS82]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.