Factsheet for Zm00001d030297_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010317_P001	Maize	cytosol, golgi, plastid	28.46	82.49
Zm00001d050809_P001	Maize	cytosol	18.71	69.57
Zm00001d000089_P001	Maize	cytosol	22.61	49.79
Zm00001d039647_P001	Maize	plasma membrane	39.38	30.15
Zm00001d042982_P001	Maize	plasma membrane	28.27	21.94
Zm00001d009789_P006	Maize	plasma membrane	29.43	21.63
CDY69873	Canola	golgi, plasma membrane	17.74	18.57
CDX93980	Canola	plasma membrane	24.17	17.56
Bra014404.1-P	Field mustard	plasma membrane	24.17	17.54
CDY27507	Canola	plasma membrane	23.78	17.38
Solyc01g079150.2.1	Tomato	plasma membrane	24.37	17.36
CDX80082	Canola	plasma membrane	23.78	17.33
CDY37790	Canola	plasma membrane	23.78	17.33
Bra021386.1-P	Field mustard	plasma membrane	23.59	17.26
CDY51414	Canola	plasma membrane	23.59	17.24
Bra000442.1-P	Field mustard	plasma membrane	23.59	17.21
AT3G62270.1	Thale cress	plasma membrane	23.59	17.21
CDY50920	Canola	plasma membrane	23.59	17.19
Bra004476.1-P	Field mustard	plasma membrane	23.59	17.19
Zm00001d041590_P001	Maize	plasma membrane	23.39	17.09
PGSC0003DMT400013372	Potato	plasma membrane	23.98	17.08
CDX83341	Canola	plasma membrane	23.39	17.05
VIT_07s0005g02060.t01	Wine grape	plasma membrane	23.78	17.02
AT2G47160.2	Thale cress	plasma membrane	23.98	16.87
Zm00001d030656_P001	Maize	plasma membrane	22.81	16.5
Zm00001d048447_P002	Maize	cytosol	26.32	15.55
CDY37788	Canola	cytosol	3.31	13.93
KRH74995	Soybean	extracellular	1.17	7.23
CDY37789	Canola	endoplasmic reticulum, golgi	0.0	0.0

Protein Annotations

MapMan:24.2.3.6	UniProt:A0A1D6KBT2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575
GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021
InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	ProteinID:ONM00762.1	PFAM:PF00955	PANTHER:PTHR11453	PANTHER:PTHR11453:SF40
TMHMM:TMhelix	UniParc:UPI0008448A9D	EnsemblPlantsGene:Zm00001d030297	EnsemblPlants:Zm00001d030297_P001	EnsemblPlants:Zm00001d030297_T001	SEG:seg

Description

Boron transporter 4

Coordinates

chr1:+:120263198..120268532

Molecular Weight (calculated)

55904.5 Da

IEP (calculated)

8.983

GRAVY (calculated)

-0.230

Length

513 amino acids

Sequence
(BLAST)

001: MAVVPRSPSW QSRQVSPSQI TSTPGKVFPK SRILSDGAHV QRDPRERTQA VAAHLVRLVL PRVYPTNTRN GSPDVSGSAD IAGLSRVDLV GGTRKLGGAA
101: QRRAREVGPR LKMVRSMREQ GGGRWPDGDF LVSSPPLPSG RAGPGFRWKM RPAVVPTSAR VRAFNPFSMP GIYLTCIVEL DGIVGGAAHG AHPGGELASE
201: RLLRDTEELA VEVEREQRVQ DLHGVLLELH HGGEGLHLDL HLLALHGELP LLGGEAEELV LGGVHADGGA GGFTRMAAAA GEEALSSATK QKVAAVKQYI
301: ENHYMSQMMS LQDGKERVHV MLPSRIKVVA VSRSIKCDKD LFSVSPAYIF GAILPAFMVA GLYFFDHNVD SQLAQQKEYN LKKPSAYHYN ILVLGFVVLL
401: CGLLGIPPSN GVLPQSPMHT KSLAVIKRQF LSKKMVDTAK ESIGGSATSL EIYGKMEEVF IKMDSEENTD SVERELKNFK DVVLQEGNEE GRLAREFDPR
501: KHIEAHLPVR VNE

Best Arabidopsis Sequence Match ( AT1G15460.4 )
(BLAST)

001: MYVYLYNFAI GRPELGKQLY LAWAAWVCVW TALLLFVMAI LNTADIINRF TRVAGELFGM LISVLFIQQA IKGMVSEFGM PKDEDSKLEK YKFEWLYTNG
101: LLGLIFTFGL LYTALKSRKA RSWRYGTGWY RSFIADYGVP LMVVVWTALS FSTPSKLPSG VPRRLFSPLP WDSPSLSHWT VIKDMGKVSP GYIFAAFIPA
201: LMIAGLYFFD HSVASQLAQQ KEFNLKKPSA YHYDILLLGF MTLICGLLGL PPSNGVLPQS PMHTKSLAVL KRQLIRRKMV KTAKESIRKR ETSSQVYENM
301: QEVFIEMDKS PLAQTDPSVI IELQDLKEAV MKSNDEEREG DEESGFDPEK HLDAYLPVRV NEQRVSNLLQ SLLVAGAVLA MPAIKLIPTS ILWGYFAYMA
401: IDSLPGNQFF ERLTLLFVPT SRRFKVLEGA HASFVEKVPY KSMAAFTLLQ IFYFGLCYGV TWIPVAGIMF PVPFFLLIAI RQYILPKLFN PAHLRELDAA
501: EYEEIPGTPR NPLELSFRSN DSKRGVQEGD AEILDELTTS RGELKVRTLN LNEDKGNQIY PKEKVKAGDG DMSTTRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.