Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
23508561
plasma membrane: 27341663 |
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041590_P001 | Maize | plasma membrane | 95.06 | 96.01 |
| Os12t0566000-02 | Rice | plasma membrane | 93.79 | 93.53 |
| TraesCS5B01G091200.1 | Wheat | plasma membrane | 91.96 | 91.57 |
| TraesCS5D01G097600.1 | Wheat | plasma membrane | 91.68 | 91.29 |
| HORVU5Hr1G022140.1 | Barley | cytosol, golgi, plasma membrane | 91.4 | 91.01 |
| TraesCS5A01G085200.1 | Wheat | plasma membrane | 91.4 | 91.01 |
| GSMUA_Achr3P12750_001 | Banana | plasma membrane | 85.19 | 84.01 |
| GSMUA_Achr3P24480_001 | Banana | golgi, peroxisome, plasma membrane | 84.63 | 83.45 |
| Zm00001d039647_P001 | Maize | plasma membrane | 52.05 | 55.07 |
| Zm00001d009789_P006 | Maize | plasma membrane | 50.92 | 51.72 |
| Zm00001d042982_P001 | Maize | plasma membrane | 46.83 | 50.23 |
| Zm00001d010317_P001 | Maize | cytosol, golgi, plastid | 10.86 | 43.5 |
| Zm00001d048447_P002 | Maize | cytosol | 41.75 | 34.1 |
| Zm00001d000089_P001 | Maize | cytosol | 9.03 | 27.47 |
| Zm00001d050809_P001 | Maize | cytosol | 5.22 | 26.81 |
| Zm00001d030297_P001 | Maize | plastid | 16.5 | 22.81 |
Protein Annotations
| EntrezGene:100285382 | MapMan:24.2.3.6 | UniProt:B6U4C0 | EMBL:BT060849 | EMBL:EU972085 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005452 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006820 | GO:GO:0008150 |
| GO:GO:0015698 | GO:GO:0016020 | GO:GO:0016021 | InterPro:HCO3_transpt_C | InterPro:HCO3_transpt_euk | EMBL:KP751214 |
| ProteinID:ONM01244.1 | PFAM:PF00955 | PANTHER:PTHR11453 | PANTHER:PTHR11453:SF51 | TMHMM:TMhelix | UniParc:UPI000182F69B |
| EnsemblPlantsGene:Zm00001d030656 | EnsemblPlants:Zm00001d030656_P001 | EnsemblPlants:Zm00001d030656_T001 | SEG:seg | : | : |
Description
rotten ear1 rotten ear1
Coordinates
chr1:+:151221229..151225821
Molecular Weight (calculated)
78973.0 Da
IEP (calculated)
9.324
GRAVY (calculated)
0.187
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESFVPLRG IKDDLHGRLA CYKQDWTGGF RAGIRILAPT TYIFFASAIP VISFGEQLER NTDGVLTAVQ TLASTALCGI IHSIVGGQPL LILGVAEPTV
101: LMYTFMFNFA KDRPDLGRNL FLAWTGWVCV WTAILLFLLA ILGACSIINR FTRIAGELFG LLIAMLFMQQ AIKGLVDEFR VPERENTKAL EFVPSWRFAN
201: GMFAIVLSFG LLLTALRSRK ARSWRYGTGW LRGFIADYGV PLMVLVWTGV SYIPYGNVPK GIPRRLFSPN PWSPGAYDNW TVVKDMTQVP LLYILGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPP SFHYDLLLLG FLTLMCGLIG IPPSNGVIPQ SPMHTKSLAT LKHQILRNRL VATARKGMSQ NASLSQLYGS
401: MQDAYQQMQT PLVYQQQSVR RGLNELKDST VQLASSMGNI DAPVDETVFD IEKEIDDLLP IEVKEQRLSN LLQASMVVGC VAAMPLLKKI PTSVLWGYFA
501: FMAIESLPGN QFWERILLLF TAPSRRYKVL EEYHTTFVET VPFKTIAMFT VFQTAYLLVC FGITWIPIAG VLFPLMIMLL VPVRQYILPK LFKGAHLTDL
601: DAAEYEESPA IPFSLAAQDI DVALGRSQSA EILDDMVTRS RGEIKRLNSP KITSSGGTPV AELKGIRSPS ISEKAYSPRL TELQHERSPL GGRSRPRTPS
701: KLGEGSAPK
101: LMYTFMFNFA KDRPDLGRNL FLAWTGWVCV WTAILLFLLA ILGACSIINR FTRIAGELFG LLIAMLFMQQ AIKGLVDEFR VPERENTKAL EFVPSWRFAN
201: GMFAIVLSFG LLLTALRSRK ARSWRYGTGW LRGFIADYGV PLMVLVWTGV SYIPYGNVPK GIPRRLFSPN PWSPGAYDNW TVVKDMTQVP LLYILGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPP SFHYDLLLLG FLTLMCGLIG IPPSNGVIPQ SPMHTKSLAT LKHQILRNRL VATARKGMSQ NASLSQLYGS
401: MQDAYQQMQT PLVYQQQSVR RGLNELKDST VQLASSMGNI DAPVDETVFD IEKEIDDLLP IEVKEQRLSN LLQASMVVGC VAAMPLLKKI PTSVLWGYFA
501: FMAIESLPGN QFWERILLLF TAPSRRYKVL EEYHTTFVET VPFKTIAMFT VFQTAYLLVC FGITWIPIAG VLFPLMIMLL VPVRQYILPK LFKGAHLTDL
601: DAAEYEESPA IPFSLAAQDI DVALGRSQSA EILDDMVTRS RGEIKRLNSP KITSSGGTPV AELKGIRSPS ISEKAYSPRL TELQHERSPL GGRSRPRTPS
701: KLGEGSAPK
001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR APAREDLKLV EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLVADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP IVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKQ NASLGQLYGN
401: MQDVYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPLLKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLTCFGL TWIPIAGVMF PLLIMFLIPV RQYILPRFFK SAHLQDLDAA
601: EYEEAPALPF HLAVPEAEMG STASYPCDSE ILDEFITRSR GEFRHTCSPK VTSSTSTPVY NRNLSQVFSP RVIDLRGEMS PRLSGKGQNS PKPSPLNPSS
701: SSK
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR APAREDLKLV EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLVADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP IVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKQ NASLGQLYGN
401: MQDVYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPLLKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLTCFGL TWIPIAGVMF PLLIMFLIPV RQYILPRFFK SAHLQDLDAA
601: EYEEAPALPF HLAVPEAEMG STASYPCDSE ILDEFITRSR GEFRHTCSPK VTSSTSTPVY NRNLSQVFSP RVIDLRGEMS PRLSGKGQNS PKPSPLNPSS
701: SSK
Arabidopsis Description
BOR2Probable boron transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1P7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.