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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • golgi 1
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G085200.1 Wheat plasma membrane 97.61 97.61
TraesCS5B01G091200.1 Wheat plasma membrane 97.61 97.61
TraesCS5D01G097600.1 Wheat plasma membrane 97.61 97.61
KXG23716 Sorghum plasma membrane 91.99 92.38
Os12t0566000-02 Rice plasma membrane 92.13 92.26
Zm00001d030656_P001 Maize plasma membrane 91.01 91.4
Zm00001d041590_P001 Maize plasma membrane 89.89 91.17
GSMUA_Achr3P12750_001 Banana plasma membrane 83.99 83.17
GSMUA_Achr3P24480_001 Banana golgi, peroxisome, plasma membrane 82.87 82.06
VIT_07s0005g02060.t01 Wine grape plasma membrane 80.48 79.92
PGSC0003DMT400013372 Potato plasma membrane 79.35 78.47
VIT_05s0020g00440.t01 Wine grape plasma membrane 78.93 78.38
Solyc01g079150.2.1 Tomato plasma membrane 79.07 78.19
CDX83341 Canola plasma membrane 76.54 77.41
CDY51414 Canola plasma membrane 76.26 77.35
Bra021386.1-P Field mustard plasma membrane 76.12 77.32
CDY50920 Canola plasma membrane 76.4 77.27
CDX80082 Canola plasma membrane 76.4 77.27
Bra000442.1-P Field mustard plasma membrane 76.26 77.24
CDY27507 Canola plasma membrane 76.12 77.21
CDX93980 Canola plasma membrane 76.54 77.2
CDY37790 Canola plasma membrane 76.26 77.13
Bra014404.1-P Field mustard plasma membrane 76.54 77.09
KRG96573 Soybean plasma membrane 77.95 76.76
AT3G62270.1 Thale cress plasma membrane 75.7 76.67
KRH36909 Soybean plasma membrane 76.12 76.55
KRH68309 Soybean plasma membrane 77.67 76.49
Bra004476.1-P Field mustard plasma membrane 75.56 76.42
Solyc01g057770.2.1 Tomato plasma membrane 75.14 75.04
PGSC0003DMT400046121 Potato plasma membrane 75.0 74.89
AT2G47160.2 Thale cress plasma membrane 76.26 74.49
KRH11879 Soybean plasma membrane 65.03 73.96
CDY69873 Canola golgi, plasma membrane 49.44 71.84
CDY37788 Canola cytosol 9.83 57.38
HORVU3Hr1G023560.1 Barley plasma membrane 50.56 54.05
HORVU3Hr1G023480.4 Barley plasma membrane 50.56 54.05
HORVU4Hr1G081330.4 Barley plasma membrane 50.28 53.19
HORVU0Hr1G032340.2 Barley plasma membrane 35.53 49.9
CDY37789 Canola endoplasmic reticulum, golgi 15.45 49.33
HORVU1Hr1G025890.7 Barley plastid 50.7 46.05
KRH74995 Soybean extracellular 4.49 38.55
Protein Annotations
EnsemblPlants:HORVU5Hr1G022140.1EnsemblPlantsGene:HORVU5Hr1G022140GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575
GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_eukPANTHER:PTHR11453PANTHER:PTHR11453:SF51PFAM:PF00955SEG:segTMHMM:TMhelix
MapMan:24.2.3.6:::::
Description
No Description!
Coordinates
chrchr5H:-:111221448..111341583
Molecular Weight (calculated)
79300.3 Da
IEP (calculated)
8.651
GRAVY (calculated)
0.194
Length
712 amino acids
Sequence
(BLAST)
001: MEESFVPLRG IKNDLRGRLT CYKQDWTGGF SAGIRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTALCGI IHSVVGGQPL LILGVAEPTV
101: IMYTFMFSFA KDRADLGPNL FLAWAGWVCV WTAVLLFLLA VLGACSIINR FTRIAGELFG LLIAMLFMQQ AIKGLVDEFR IPERENIKAL QFVPSWRFAN
201: GMFAIVLSFG LLLTALRSRK ARSWRYGAGW LRGFIADYGV PLMVLVWTGV SYIPHDSVPK GIPRRLFSPN PWSPGAYDNW TVIQDMPNVP LMYIIGAFMP
301: ATMIAVLYYF DHSVASQLAQ QAEFNLRKPP SFHYDLLLLG FLTLLCGLIG IPPSNGVIPQ SPMHTKSLAT LKHQILRNRL VATARQSMRQ NASLSQLYNS
401: MQDAYHQIQT PLIHQQQSVK GLNELKDSTV QLASSMGNFD APVDETIFDI EKEIDDLLPM EVKEQRLSNF LQAVMVGGCI AAMPLLKRIP TAVLWGYFAF
501: MAIESLPGNQ FWERILLLFT APSRRYKVLE EYHTTFVETV PFKTIAMFTL FQTTYLLVCF GITWIPIAGV LFPLMIMLLV PVRQYILPKL FKGAHLNDLD
601: AAEYEESPAI PFNLAAQDID VALGHTQSAE ILDDMVTRSR GEIKRLNSPK ITSSGGTPVT ELKGIRSPCI SEKAYSPRIT ELRHERSPLG GRDSPRTGEA
701: RPSKLGEGST PK
Best Arabidopsis Sequence Match ( AT3G62270.1 )
(BLAST)
001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR APAREDLKLV EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLVADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP IVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKQ NASLGQLYGN
401: MQDVYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPLLKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLTCFGL TWIPIAGVMF PLLIMFLIPV RQYILPRFFK SAHLQDLDAA
601: EYEEAPALPF HLAVPEAEMG STASYPCDSE ILDEFITRSR GEFRHTCSPK VTSSTSTPVY NRNLSQVFSP RVIDLRGEMS PRLSGKGQNS PKPSPLNPSS
701: SSK
Arabidopsis Description
BOR2Probable boron transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1P7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.