Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37790 | Canola | plasma membrane | 93.55 | 96.88 |
| CDX80082 | Canola | plasma membrane | 93.28 | 96.59 |
| CDY51414 | Canola | plasma membrane | 93.0 | 96.58 |
| CDY27507 | Canola | plasma membrane | 92.59 | 96.15 |
| Bra021386.1-P | Field mustard | plasma membrane | 92.46 | 96.15 |
| CDX83341 | Canola | plasma membrane | 92.59 | 95.88 |
| CDY50920 | Canola | plasma membrane | 92.46 | 95.74 |
| Bra004476.1-P | Field mustard | plasma membrane | 92.32 | 95.6 |
| Bra000442.1-P | Field mustard | plasma membrane | 92.04 | 95.45 |
| AT3G62270.1 | Thale cress | plasma membrane | 87.52 | 90.75 |
| VIT_07s0005g02060.t01 | Wine grape | plasma membrane | 79.15 | 80.47 |
| KXG23716 | Sorghum | plasma membrane | 76.13 | 78.28 |
| Os12t0566000-02 | Rice | plasma membrane | 75.72 | 77.64 |
| TraesCS5A01G085200.1 | Wheat | plasma membrane | 75.45 | 77.25 |
| GSMUA_Achr3P12750_001 | Banana | plasma membrane | 76.13 | 77.19 |
| PGSC0003DMT400013372 | Potato | plasma membrane | 76.13 | 77.08 |
| TraesCS5B01G091200.1 | Wheat | plasma membrane | 75.17 | 76.97 |
| TraesCS5D01G097600.1 | Wheat | plasma membrane | 75.17 | 76.97 |
| Solyc01g079150.2.1 | Tomato | plasma membrane | 75.99 | 76.94 |
| HORVU5Hr1G022140.1 | Barley | cytosol, golgi, plasma membrane | 74.49 | 76.26 |
| GSMUA_Achr3P24480_001 | Banana | golgi, peroxisome, plasma membrane | 74.49 | 75.52 |
| AT3G06450.1 | Thale cress | plasma membrane | 67.76 | 67.49 |
| AT1G15460.1 | Thale cress | cytosol, golgi, peroxisome | 53.64 | 57.25 |
| AT1G74810.4 | Thale cress | plasma membrane | 51.71 | 55.2 |
| AT5G25430.1 | Thale cress | golgi, peroxisome, plasma membrane | 50.34 | 54.69 |
| AT4G32510.2 | Thale cress | plasma membrane | 49.52 | 53.48 |
| Zm00001d010317_P001 | Maize | cytosol, golgi, plastid | 11.52 | 47.46 |
| Zm00001d050809_P001 | Maize | cytosol | 5.49 | 28.99 |
| Zm00001d000089_P001 | Maize | cytosol | 8.92 | 27.9 |
| Zm00001d030297_P001 | Maize | plastid | 16.87 | 23.98 |
Protein Annotations
| MapMan:24.2.3.6 | EntrezGene:819329 | UniProt:A8MS82 | ProteinID:AEC10809.1 | ArrayExpress:AT2G47160 | EnsemblPlantsGene:AT2G47160 |
| RefSeq:AT2G47160 | TAIR:AT2G47160 | RefSeq:AT2G47160-TAIR-G | EnsemblPlants:AT2G47160.2 | TAIR:AT2G47160.2 | Unigene:At.24088 |
| Symbol:BOR1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005452 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005773 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006820 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016328 |
| GO:GO:0031012 | GO:GO:0043674 | GO:GO:0046713 | InterPro:HCO3_transpt_C | InterPro:HCO3_transpt_euk | RefSeq:NP_001078071.1 |
| PFAM:PF00955 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000252 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004013 | PO:PO:0004507 |
| PO:PO:0006203 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020123 | PO:PO:0020131 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025181 |
| PO:PO:0025281 | PANTHER:PTHR11453 | PANTHER:PTHR11453:SF51 | TMHMM:TMhelix | UniParc:UPI000150550C | SEG:seg |
Description
BOR1HCO3-transporter family [Source:UniProtKB/TrEMBL;Acc:A8MS82]
Coordinates
chr2:-:19357478..19361162
Molecular Weight (calculated)
81437.8 Da
IEP (calculated)
8.924
GRAVY (calculated)
0.192
Length
729 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGF KAGFRILAPT TYIFFASAIP VISFGEQLER STGNSAKSFY LALFQLRNLK LDSEIFADGV LTAVQTLAST
101: AICGMIHSII GGQPLLILGV AEPTVIMYTF MFNFAKARPE LGRDLFLAWS GWVCVWTALM LFVLAICGAC SIINRFTRVA GELFGLLIAM LFMQQAIKGL
201: VDEFRIPERE NQKLKEFLPS WRFANGMFAL VLSFGLLLTG LRSRKARSWR YGTGWLRSLI ADYGVPLMVL VWTGVSYIPA GDVPKGIPRR LFSPNPWSPG
301: AYGNWTVVKE MLDVPIVYII GAFIPASMIA VLYYFDHSVA SQLAQQKEFN LRKPSSYHYD LLLLGFLTLM CGLLGVPPSN GVIPQSPMHT KSLATLKYQL
401: LRNRLVATAR RSIKTNASLG QLYDNMQEAY HHMQTPLVYQ QPQGLKELKE STIQATTFTG NLNAPVDETL FDIEKEIDDL LPVEVKEQRV SNLLQSTMVG
501: GCVAAMPILK MIPTSVLWGY FAFMAIESLP GNQFWERILL LFTAPSRRFK VLEDYHATFV ETVPFKTIAM FTLFQTTYLL ICFGLTWIPI AGVMFPLMIM
601: FLIPVRQYLL PRFFKGAHLQ DLDAAEYEEA PALPFNLAAE TEIGSTTSYP GDLEILDEVM TRSRGEFRHT SSPKVTSSSS TPVNNRSLSQ VFSPRVSGIR
701: LGQMSPRVVG NSPKPASCGR SPLNQSSSN
101: AICGMIHSII GGQPLLILGV AEPTVIMYTF MFNFAKARPE LGRDLFLAWS GWVCVWTALM LFVLAICGAC SIINRFTRVA GELFGLLIAM LFMQQAIKGL
201: VDEFRIPERE NQKLKEFLPS WRFANGMFAL VLSFGLLLTG LRSRKARSWR YGTGWLRSLI ADYGVPLMVL VWTGVSYIPA GDVPKGIPRR LFSPNPWSPG
301: AYGNWTVVKE MLDVPIVYII GAFIPASMIA VLYYFDHSVA SQLAQQKEFN LRKPSSYHYD LLLLGFLTLM CGLLGVPPSN GVIPQSPMHT KSLATLKYQL
401: LRNRLVATAR RSIKTNASLG QLYDNMQEAY HHMQTPLVYQ QPQGLKELKE STIQATTFTG NLNAPVDETL FDIEKEIDDL LPVEVKEQRV SNLLQSTMVG
501: GCVAAMPILK MIPTSVLWGY FAFMAIESLP GNQFWERILL LFTAPSRRFK VLEDYHATFV ETVPFKTIAM FTLFQTTYLL ICFGLTWIPI AGVMFPLMIM
601: FLIPVRQYLL PRFFKGAHLQ DLDAAEYEEA PALPFNLAAE TEIGSTTSYP GDLEILDEVM TRSRGEFRHT SSPKVTSSSS TPVNNRSLSQ VFSPRVSGIR
701: LGQMSPRVVG NSPKPASCGR SPLNQSSSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.