CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80082	Canola	plasma membrane	99.43	99.43
Bra004476.1-P	Field mustard	plasma membrane	98.44	98.44
CDY51414	Canola	plasma membrane	97.02	97.29
CDY27507	Canola	plasma membrane	96.31	96.58
CDX83341	Canola	plasma membrane	96.31	96.31
CDY50920	Canola	plasma membrane	95.88	95.88
AT2G47160.2	Thale cress	plasma membrane	96.88	93.55
CDX93980	Canola	plasma membrane	91.48	91.22
CDY69873	Canola	golgi, plasma membrane	61.65	88.57
VIT_07s0005g02060.t01	Wine grape	plasma membrane	82.24	80.75
KXG23716	Sorghum	plasma membrane	78.98	78.42
Solyc01g079150.2.1	Tomato	plasma membrane	79.69	77.92
PGSC0003DMT400013372	Potato	plasma membrane	79.69	77.92
Os12t0566000-02	Rice	plasma membrane	78.55	77.78
TraesCS5A01G085200.1	Wheat	plasma membrane	77.84	76.97
GSMUA_Achr3P12750_001	Banana	plasma membrane	78.41	76.77
TraesCS5B01G091200.1	Wheat	plasma membrane	77.56	76.69
TraesCS5D01G097600.1	Wheat	plasma membrane	77.56	76.69
HORVU5Hr1G022140.1	Barley	cytosol, golgi, plasma membrane	77.13	76.26
GSMUA_Achr3P24480_001	Banana	golgi, peroxisome, plasma membrane	77.84	76.22
CDY37789	Canola	endoplasmic reticulum, golgi	22.59	71.3
CDY37788	Canola	cytosol	11.65	67.21
CDX74103	Canola	plasma membrane	70.03	66.8
CDY08050	Canola	plasma membrane	69.89	66.76
CDY39649	Canola	plasma membrane	56.25	58.67
CDY37274	Canola	plasma membrane	54.69	56.37
CDY68117	Canola	plasma membrane	54.69	56.37
CDY13492	Canola	plasma membrane	51.7	55.15
CDX72362	Canola	plasma membrane	51.56	54.92
CDX88179	Canola	plasma membrane	52.27	54.76
CDX80510	Canola	plasma membrane	52.13	54.69
CDX68852	Canola	plasma membrane	51.85	54.48
CDY46028	Canola	cytosol, golgi, plasma membrane	38.78	51.22
Zm00001d010317_P001	Maize	cytosol, golgi, plastid	11.79	46.89
CDX75250	Canola	plastid	51.56	29.88
Zm00001d050809_P001	Maize	cytosol	5.68	28.99
Zm00001d000089_P001	Maize	cytosol	9.23	27.9
CDY36563	Canola	plasma membrane	56.39	25.27
Zm00001d030297_P001	Maize	plastid	17.33	23.78
CDX68853	Canola	plastid	0.14	0.19

Protein Annotations

MapMan:24.2.3.6	GO:A0A078HHF6	UniProt:A0A078HHF6	EnsemblPlants:CDY37790	ProteinID:CDY37790	ProteinID:CDY37790.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575	GO:GO:0006810	GO:GO:0006820
GO:GO:0008150	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00064725001	InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_euk	PFAM:PF00955	PANTHER:PTHR11453	PANTHER:PTHR11453:SF51	TMHMM:TMhelix	UniParc:UPI0004EDF550
SEG:seg	:	:	:	:	:

Description

BnaC04g00350DBnaC04g00350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHF6]

Coordinates

chrLK032408:-:196257..199440

Molecular Weight (calculated)

78650.5 Da

IEP (calculated)

8.814

GRAVY (calculated)

0.200

Length

704 amino acids

Sequence
(BLAST)

001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGF KAGFRILAPT TYIFFASAIP VISFGEQLER NTDGVLTAVQ TLASTAICGI IHSVIGGQPL LILGVAEPTV
101: IMYTFMFNFA KARPELGRDL FLAWSGWVCV WTALMLFVMA ICGACSIINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR IPERENQKLM EFLPSWRFAN
201: GMFALVLSFG LLLTGLRSRK ARSWRYGTGW LRSLIADYGV PLMVLVWTGV SYIPSGDVPK GIPRRLLSPN PWSPGAYGNW TVAKEMLDVP IVYIIGAFIP
301: ASMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG VPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKT NASLGQLYNN
401: MQEAYHHMQT PLVYQQPQGL KELKESTIQA TTFTGNLNAP VDETLFDIEK EIDDLLPVEV KEQRVSNLLQ STMVGGCVAA MPILKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDY HATFVETVPF KTIAMFTIFQ TVYLLICFGL TWIPIAGVMF PLMIMFLIPV RQYILPRFFK GAHLQDLDAA
601: EYEEAPALPF NLAVETEIGS TTSYPGDSEI LDEVITRSRG EFRHTSSPKV TSSSSTPVNN RSLSQVFSPR VGELRFGQMS PRVVGNSPKP VSCGRSPLNQ
701: SSSK

Best Arabidopsis Sequence Match ( AT2G47160.1 )
(BLAST)

001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGF KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGM IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KARPELGRDL FLAWSGWVCV WTALMLFVLA ICGACSIINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR IPERENQKLK EFLPSWRFAN
201: GMFALVLSFG LLLTGLRSRK ARSWRYGTGW LRSLIADYGV PLMVLVWTGV SYIPAGDVPK GIPRRLFSPN PWSPGAYGNW TVVKEMLDVP IVYIIGAFIP
301: ASMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG VPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARRSIKT NASLGQLYDN
401: MQEAYHHMQT PLVYQQPQGL KELKESTIQA TTFTGNLNAP VDETLFDIEK EIDDLLPVEV KEQRVSNLLQ STMVGGCVAA MPILKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDY HATFVETVPF KTIAMFTLFQ TTYLLICFGL TWIPIAGVMF PLMIMFLIPV RQYLLPRFFK GAHLQDLDAA
601: EYEEAPALPF NLAAETEIGS TTSYPGDLEI LDEVMTRSRG EFRHTSSPKV TSSSSTPVNN RSLSQVFSPR VSGIRLGQMS PRVVGNSPKP ASCGRSPLNQ
701: SSSN

Arabidopsis Description

BOR1HCO3-transporter family [Source:UniProtKB/TrEMBL;Acc:A8MS82]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.