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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • cytosol 2
  • golgi 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
BaCelLo:cytosol
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008167.1-P Field mustard plasma membrane 95.87 74.82
CDY68117 Canola plasma membrane 95.87 74.82
CDY37274 Canola plasma membrane 95.87 74.82
CDY39649 Canola plasma membrane 81.24 64.15
AT1G74810.4 Thale cress plasma membrane 80.3 62.66
HORVU0Hr1G032340.2 Barley plasma membrane 56.47 59.37
GSMUA_Achr2P19680_001 Banana plasma membrane 60.6 48.57
HORVU3Hr1G023480.4 Barley plasma membrane 60.41 48.35
HORVU3Hr1G023560.1 Barley plasma membrane 60.41 48.35
CDY13492 Canola plasma membrane 59.85 48.33
CDX72362 Canola plasma membrane 59.47 47.96
TraesCS3A01G126300.1 Wheat golgi 59.85 47.9
GSMUA_Achr5P06140_001 Banana plasma membrane 59.85 47.83
CDY69873 Canola golgi, plasma membrane 43.9 47.76
TraesCS5A01G501500.1 Wheat plasma membrane 59.66 47.68
TraesCS4B01G330000.1 Wheat plasma membrane 59.66 47.68
TraesCS4D01G326900.1 Wheat plasma membrane 59.47 47.6
HORVU4Hr1G081330.4 Barley plasma membrane 60.04 47.55
CDX68852 Canola plasma membrane 59.66 47.46
TraesCS3B01G145500.3 Wheat plasma membrane 60.04 47.41
Zm00001d039647_P001 Maize plasma membrane 59.47 47.31
CDX88179 Canola plasma membrane 59.47 47.17
Os01t0175600-01 Rice plasma membrane 59.29 47.02
Os05t0176800-01 Rice plasma membrane 59.66 46.97
OQU86222 Sorghum plasma membrane 58.35 46.91
Os01t0175700-01 Rice plasma membrane 59.1 46.88
CDX80510 Canola plasma membrane 58.91 46.8
TraesCS7B01G475400.1 Wheat plasma membrane 57.6 46.52
KXG21448 Sorghum plasma membrane 56.66 43.96
TraesCS3D01G127300.4 Wheat plasma membrane 58.35 43.86
Zm00001d009789_P006 Maize plasma membrane 55.53 42.41
TraesCS1B01G137300.2 Wheat mitochondrion, plasma membrane 56.66 40.11
TraesCS1D01G118600.2 Wheat plasma membrane 57.04 39.63
TraesCS1A01G117500.3 Wheat plasma membrane 57.04 39.53
Zm00001d042982_P001 Maize plasma membrane 48.97 39.49
HORVU1Hr1G025890.7 Barley plastid 57.22 38.9
CDY37790 Canola plasma membrane 51.22 38.78
CDX80082 Canola plasma membrane 51.03 38.64
CDY50920 Canola plasma membrane 50.84 38.49
CDY27507 Canola plasma membrane 50.66 38.46
CDX83341 Canola plasma membrane 50.66 38.35
CDY51414 Canola plasma membrane 50.47 38.32
CDX93980 Canola plasma membrane 50.47 38.1
CDX74103 Canola plasma membrane 48.97 35.37
CDY37788 Canola cytosol 8.07 35.25
CDY08050 Canola plasma membrane 48.59 35.14
CDY37789 Canola endoplasmic reticulum, golgi 13.88 33.18
Zm00001d048447_P002 Maize cytosol 45.03 27.65
CDY36563 Canola plasma membrane 81.43 27.63
CDX75250 Canola plastid 59.47 26.09
CDX68853 Canola plastid 0.0 0.0
Protein Annotations
MapMan:24.2.3.6GO:A0A078IA44UniProt:A0A078IA44EnsemblPlants:CDY46028ProteinID:CDY46028ProteinID:CDY46028.1
GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575GO:GO:0006810GO:GO:0006820
GO:GO:0008150GO:GO:0015698GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00083145001InterPro:HCO3_transpt_C
InterPro:HCO3_transpt_eukPFAM:PF00955PANTHER:PTHR11453PANTHER:PTHR11453:SF48TMHMM:TMhelixUniParc:UPI0004EE0C47
SEG:seg:::::
Description
BnaA02g16980DBnaA02g16980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IA44]
Coordinates
chrLK032646:-:59286..72646
Molecular Weight (calculated)
60136.2 Da
IEP (calculated)
6.612
GRAVY (calculated)
-0.015
Length
533 amino acids
Sequence
(BLAST)
001: MLVCGRGQED FDYFDRVVTQ TLNIDIKNGM LSEFKMPDHE DSTLEKYQFQ WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRNFI ADYGVPLMVV
101: VWTALSFSTP STLPSGVPRR LSSPLPWDSA SLGHWTVIKD MGKVPPPYIF AGFIPALMIA GLYFFDHSVV AQLAQQKEFN LKNPSAYHYD VLLLGFMVLV
201: CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVMTAK ESMRKRASSS QVYENMQEVF IEMDKSPLVQ TNSTHILELQ DLKDAVMKKT DEEGDSSEEG
301: GFDPEKHLEA FLPVRVNEQR VSNLLQSLLV AGAVLAIPAI KLIPTSLLWG YFAYMAIDSL PGNQFFERTV LLFVPPSRRF KVLEGAHASF VEKVPYKSMA
401: AFTMLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYL LPKLFKPAHL RELDASEYEE IPGTPRNPLE LSFRSTGSMK DVLECDAEIL DELTTSRGEL
501: RVRPVSLSPD KGPQIYPNEI VEAGDGDMST PRE
Best Arabidopsis Sequence Match ( AT1G15460.4 )
(BLAST)
001: MYVYLYNFAI GRPELGKQLY LAWAAWVCVW TALLLFVMAI LNTADIINRF TRVAGELFGM LISVLFIQQA IKGMVSEFGM PKDEDSKLEK YKFEWLYTNG
101: LLGLIFTFGL LYTALKSRKA RSWRYGTGWY RSFIADYGVP LMVVVWTALS FSTPSKLPSG VPRRLFSPLP WDSPSLSHWT VIKDMGKVSP GYIFAAFIPA
201: LMIAGLYFFD HSVASQLAQQ KEFNLKKPSA YHYDILLLGF MTLICGLLGL PPSNGVLPQS PMHTKSLAVL KRQLIRRKMV KTAKESIRKR ETSSQVYENM
301: QEVFIEMDKS PLAQTDPSVI IELQDLKEAV MKSNDEEREG DEESGFDPEK HLDAYLPVRV NEQRVSNLLQ SLLVAGAVLA MPAIKLIPTS ILWGYFAYMA
401: IDSLPGNQFF ERLTLLFVPT SRRFKVLEGA HASFVEKVPY KSMAAFTLLQ IFYFGLCYGV TWIPVAGIMF PVPFFLLIAI RQYILPKLFN PAHLRELDAA
501: EYEEIPGTPR NPLELSFRSN DSKRGVQEGD AEILDELTTS RGELKVRTLN LNEDKGNQIY PKEKVKAGDG DMSTTRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.