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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • peroxisome 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009789_P006 Maize plasma membrane 91.7 90.26
Zm00001d042982_P001 Maize plasma membrane 83.99 87.29
Os05t0176800-01 Rice plasma membrane 80.93 82.13
TraesCS1B01G137300.2 Wheat mitochondrion, plasma membrane 79.04 72.11
TraesCS1D01G118600.2 Wheat plasma membrane 79.18 70.93
TraesCS1A01G117500.3 Wheat plasma membrane 79.18 70.74
HORVU1Hr1G025890.7 Barley plastid 80.35 70.41
OQU86222 Sorghum plasma membrane 65.79 68.17
GSMUA_Achr2P19680_001 Banana plasma membrane 65.21 67.37
KRH23534 Soybean plasma membrane 58.22 64.72
KRH09786 Soybean plasma membrane 63.03 64.72
PGSC0003DMT400074816 Potato plasma membrane 61.72 64.63
PGSC0003DMT400014548 Potato plasma membrane 62.15 63.45
VIT_04s0008g04980.t01 Wine grape plasma membrane 61.72 63.38
GSMUA_Achr5P06140_001 Banana plasma membrane 61.43 63.27
VIT_11s0016g04740.t01 Wine grape plasma membrane 62.15 63.26
CDY39649 Canola plasma membrane 61.86 62.96
VIT_09s0002g05810.t01 Wine grape plasma membrane 62.88 62.88
KRH52492 Soybean plasma membrane 59.83 62.75
KRH61813 Soybean plasma membrane 60.41 62.69
Bra037053.1-P Field mustard plasma membrane 58.95 61.46
CDY13492 Canola plasma membrane 58.95 61.36
CDX72362 Canola plasma membrane 58.95 61.27
AT1G15460.1 Thale cress cytosol, golgi, peroxisome 60.55 60.91
CDX68852 Canola plasma membrane 59.39 60.9
Solyc03g120020.2.1 Tomato plasma membrane 61.57 60.6
KRH05103 Soybean plasma membrane 58.37 60.48
CDY37274 Canola plasma membrane 60.12 60.47
PGSC0003DMT400073484 Potato mitochondrion, plasma membrane 45.71 60.38
AT1G74810.4 Thale cress plasma membrane 59.97 60.32
Bra008167.1-P Field mustard plasma membrane 59.97 60.32
CDY68117 Canola plasma membrane 59.83 60.18
CDX88179 Canola plasma membrane 57.5 58.78
Bra009840.1-P Field mustard plasma membrane 56.62 58.76
AT4G32510.2 Thale cress plasma membrane 57.64 58.67
CDX80510 Canola plasma membrane 57.21 58.57
AT5G25430.1 Thale cress golgi, peroxisome, plasma membrane 56.91 58.27
CDY46028 Canola cytosol, golgi, plasma membrane 43.96 56.66
Zm00001d048447_P002 Maize cytosol 66.23 52.42
Solyc08g066960.2.1 Tomato plasma membrane 61.57 51.97
KXG23716 Sorghum plasma membrane 52.84 51.2
Solyc06g067900.1.1 Tomato golgi 24.89 49.0
CDX75250 Canola plastid 59.1 33.42
Bra026129.1-P Field mustard plasma membrane 62.01 27.15
CDY36563 Canola plasma membrane 61.86 27.05
CDX68853 Canola plastid 0.0 0.0
Protein Annotations
MapMan:24.2.3.6UniProt:A0A1B6P6V5GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575
GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0015698GO:GO:0016020GO:GO:0016021
InterPro:HCO3_transpt_CInterPro:HCO3_transpt_eukEnsemblPlants:KXG21448ProteinID:KXG21448ProteinID:KXG21448.1PFAM:PF00955
PANTHER:PTHR11453PANTHER:PTHR11453:SF31EnsemblPlantsGene:SORBI_3009G064200TMHMM:TMhelixUniParc:UPI0003C724A9SEG:seg
Description
hypothetical protein
Coordinates
chr9:-:6811314..6815845
Molecular Weight (calculated)
76774.8 Da
IEP (calculated)
8.064
GRAVY (calculated)
0.149
Length
687 amino acids
Sequence
(BLAST)
001: MSGPNKAPFS GVAEDLKGRA ACYKQDWNHG FRSGLRILAP TLYIFFASAV PVIAFGEQLS KDTDGTLTTV ETLASTAICG IIQSIIGGQP LLIVGVAEPT
101: IIMYTYIYNF AKNQPNLGEK MFLPWAAWVC IWTAVMLFLM AMFNVAAILN RFTRFSGELF GMLITVLFMQ EAIKGMLGEF SAPEGNDQSQ PIFQFQWLYI
201: NGLLGLIFSM GVLYTSLSSG SARSSLYGTG WQRSLIADYG VPLIVILWTA LSYSLPSKIP SGVPRRLFTP LPWEPKSLQH WTVAKDLFSV PPAHIFLAIV
301: PAAMVAGLYF FDHSVASQMA QQKEFNLKNP SAYHYDILVL SLTTLICGLL GIPPSNGVLP QSPMHTRSLA VLKRQLLRKK MVQTAKEGMM NNATSSEVYG
401: KMQDVFIKMD HGGDTVSAHK ELKDLKDAII PEGNGAGTVP EVFDPEKHVD AYLPVRVNEQ RVSNLLQSLL IAGCIGITPL IQRIPTSVLW GYFAYMSIDS
501: LPGNQFWERI KLLFITPQRR YKVLEGAHAS FMESVPFNTI CAFTAFQLIY LLIVFGMTWI PVAGILFPLL FFFLIVIRQH LIPKYFDPSH LRELDAAEYE
601: ELEGFTPDPS VCEDESVRSR DAQPGYASEI LEEFTTHRGE LKRRNSSFRD GRLLQLNSVR MTRELSRAPS RIELSRAPSR VPRVMEQ
Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)
001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.