Factsheet for Solyc06g067900.1.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
plasma membrane 4
mitochondrion 1
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073484	Potato	mitochondrion, plasma membrane	73.35	49.23
HORVU0Hr1G032340.2	Barley	plasma membrane	51.58	35.5
Solyc03g120020.2.1	Tomato	plasma membrane	65.62	32.81
KRH23534	Soybean	plasma membrane	54.15	30.58
GSMUA_Achr2P19680_001	Banana	plasma membrane	56.73	29.77
KRH09786	Soybean	plasma membrane	57.02	29.75
GSMUA_Achr5P06140_001	Banana	plasma membrane	55.3	28.94
VIT_09s0002g05810.t01	Wine grape	plasma membrane	56.45	28.68
HORVU3Hr1G023560.1	Barley	plasma membrane	53.58	28.08
TraesCS3A01G126300.1	Wheat	golgi	53.58	28.08
HORVU3Hr1G023480.4	Barley	plasma membrane	53.58	28.08
TraesCS7B01G475400.1	Wheat	plasma membrane	52.15	27.58
HORVU4Hr1G081330.4	Barley	plasma membrane	53.01	27.49
TraesCS4B01G330000.1	Wheat	plasma membrane	52.44	27.44
Os01t0175600-01	Rice	plasma membrane	52.72	27.38
Os01t0175700-01	Rice	plasma membrane	52.72	27.38
TraesCS3B01G145500.3	Wheat	plasma membrane	52.72	27.26
TraesCS4D01G326900.1	Wheat	plasma membrane	51.86	27.18
Zm00001d039647_P001	Maize	plasma membrane	51.86	27.01
TraesCS5A01G501500.1	Wheat	plasma membrane	51.58	26.99
OQU86222	Sorghum	plasma membrane	51.0	26.85
Os05t0176800-01	Rice	plasma membrane	50.72	26.14
TraesCS3D01G127300.4	Wheat	plasma membrane	50.72	24.96
KXG21448	Sorghum	plasma membrane	49.0	24.89
Zm00001d009789_P006	Maize	plasma membrane	49.0	24.5
Zm00001d042982_P001	Maize	plasma membrane	44.13	23.3
Solyc08g066960.2.1	Tomato	plasma membrane	53.87	23.1
TraesCS1B01G137300.2	Wheat	mitochondrion, plasma membrane	48.42	22.44
TraesCS1A01G117500.3	Wheat	plasma membrane	49.28	22.37
TraesCS1D01G118600.2	Wheat	plasma membrane	48.71	22.16
HORVU1Hr1G025890.7	Barley	plastid	49.28	21.94
Solyc01g079150.2.1	Tomato	plasma membrane	42.69	20.69
Solyc06g071500.2.1	Tomato	plasma membrane	41.26	20.0
Solyc01g057770.2.1	Tomato	plasma membrane	39.54	19.35
Zm00001d048447_P002	Maize	cytosol	42.69	17.17

Protein Annotations

MapMan:24.2.3.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0008509
GO:GO:0009987	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0051453
GO:GO:0098656	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	UniProt:K4C7W5	PFAM:PF00955	PANTHER:PTHR11453
PANTHER:PTHR11453:SF40	EnsemblPlantsGene:Solyc06g067900.1	EnsemblPlants:Solyc06g067900.1.1	TMHMM:TMhelix	UniParc:UPI0002765F8D	:

Description

No Description!

Coordinates

chr6:+:42087524..42089205

Molecular Weight (calculated)

39700.1 Da

IEP (calculated)

7.707

GRAVY (calculated)

0.014

Length

349 amino acids

Sequence
(BLAST)

001: MKSFLTSPFR GIIDDFHLAY QFQWLYINGL LGVMFFIGHS LHIIEKQKIK VVRVWNRSFV ADYCVPLMVL VWSELSYGVP SEVSSGVPTR LFSPLPWESA
101: SSHHWTVIKD MGKVPPTYIF AALIDGRWLK VPRRVASNSE IYGNMQAVFL EIDSSSDTTV AKKLEHLKEA VMKSTENKNG GTTEVAFDPE KHRDVHVPVR
201: VNEQRVSNLL QSLLVAASVC AMPVIKKIPN SVLWGYFAYM AIDSLPGNQL WERLLLLFIT PGRRFKVLEG VHASYVESVP FRYIAIFTIF QFMYQVKEAP
301: TNGTHEEGEV DICNAEILDE LTTSRGEFKV RSKRVYSQSE LISETVTQL

Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)

001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE

Arabidopsis Description

BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.