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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039647_P001 Maize plasma membrane 92.91 91.94
Os01t0175700-01 Rice plasma membrane 83.71 82.59
Os01t0175600-01 Rice plasma membrane 83.26 82.14
TraesCS4D01G326900.1 Wheat plasma membrane 81.45 81.08
TraesCS7B01G475400.1 Wheat plasma membrane 80.39 80.76
TraesCS4B01G330000.1 Wheat plasma membrane 81.0 80.51
TraesCS3A01G126300.1 Wheat golgi 80.84 80.48
TraesCS5A01G501500.1 Wheat plasma membrane 80.69 80.21
HORVU3Hr1G023560.1 Barley plasma membrane 80.39 80.03
HORVU3Hr1G023480.4 Barley plasma membrane 80.39 80.03
HORVU4Hr1G081330.4 Barley plasma membrane 81.15 79.94
TraesCS3B01G145500.3 Wheat plasma membrane 80.24 78.81
HORVU0Hr1G032340.2 Barley plasma membrane 59.88 78.3
TraesCS3D01G127300.4 Wheat plasma membrane 78.88 73.77
GSMUA_Achr2P19680_001 Banana plasma membrane 68.63 68.42
KRH09786 Soybean plasma membrane 68.93 68.31
KRH23534 Soybean plasma membrane 61.99 66.5
VIT_04s0008g04980.t01 Wine grape plasma membrane 66.97 66.37
PGSC0003DMT400014548 Potato plasma membrane 67.12 66.12
KXG21448 Sorghum plasma membrane 68.17 65.79
PGSC0003DMT400074816 Potato plasma membrane 64.86 65.55
GSMUA_Achr5P06140_001 Banana plasma membrane 65.46 65.07
VIT_09s0002g05810.t01 Wine grape plasma membrane 67.12 64.77
VIT_11s0016g04740.t01 Wine grape plasma membrane 65.91 64.74
CDY39649 Canola plasma membrane 65.91 64.74
KRH52492 Soybean plasma membrane 63.65 64.43
KRH61813 Soybean plasma membrane 63.8 63.9
Solyc03g120020.2.1 Tomato plasma membrane 66.82 63.47
PGSC0003DMT400073484 Potato mitochondrion, plasma membrane 49.77 63.46
AT1G15460.1 Thale cress cytosol, golgi, peroxisome 65.31 63.4
Bra037053.1-P Field mustard plasma membrane 62.59 62.97
CDY13492 Canola plasma membrane 62.59 62.88
CDX72362 Canola plasma membrane 62.59 62.78
CDX68852 Canola plasma membrane 63.05 62.39
Bra009840.1-P Field mustard plasma membrane 61.69 61.78
AT4G32510.2 Thale cress plasma membrane 62.9 61.78
CDX88179 Canola plasma membrane 62.59 61.76
CDY37274 Canola plasma membrane 63.5 61.64
KRH05103 Soybean plasma membrane 61.54 61.54
CDY68117 Canola plasma membrane 63.35 61.49
Bra008167.1-P Field mustard plasma membrane 63.35 61.49
AT1G74810.4 Thale cress plasma membrane 63.2 61.35
CDX80510 Canola plasma membrane 61.84 61.1
AT5G25430.1 Thale cress golgi, peroxisome, plasma membrane 61.39 60.66
CDY46028 Canola cytosol, golgi, plasma membrane 46.91 58.35
Solyc08g066960.2.1 Tomato plasma membrane 65.01 52.95
KXG23716 Sorghum plasma membrane 54.9 51.34
Solyc06g067900.1.1 Tomato golgi 26.85 51.0
CDX75250 Canola plastid 62.9 34.32
Bra026129.1-P Field mustard plasma membrane 65.91 27.85
CDY36563 Canola plasma membrane 65.61 27.69
CDX68853 Canola plastid 0.3 0.38
Protein Annotations
MapMan:24.2.3.6UniProt:A0A1B6Q1C6GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575
GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0015698GO:GO:0016020GO:GO:0016021
InterPro:HCO3_transpt_CInterPro:HCO3_transpt_eukProteinID:KXG31731.1EnsemblPlants:OQU86222ProteinID:OQU86222ProteinID:OQU86222.1
ProteinID:OQU86223.1PFAM:PF00955PANTHER:PTHR11453PANTHER:PTHR11453:SF40EnsemblPlantsGene:SORBI_3003G047900TMHMM:TMhelix
UniParc:UPI00081ACEFFSEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:4375572..4381767
Molecular Weight (calculated)
74141.0 Da
IEP (calculated)
6.842
GRAVY (calculated)
0.301
Length
663 amino acids
Sequence
(BLAST)
001: MDLLRHPFKG VVTDIKGRAT WYKHDWVAGV HSGFRILAPT MYIFFASALP VIAFGAQLST ATNGILTTVE TLASTAICGI IHSILGGQPL LIVGVAEPTI
101: IMYTYLYNFA KNQQALGEKL YLAWAGWVCI WTAIMLFLLA MFNASNVISR FTRVAGELFG MLITVLFLQE AIKGMISEFS VPEDADSSSP IYQFQWLYVN
201: GLLGVIFSIG LLYTALRTRR ARSWLYGIRR LRSFIADYGV PLMVIVWTAL SYTLPGKLPS GVPRRLFSPL PWESSSQGHW TIARDLFSVP PAYILAAILP
301: ALMVAGLYFF DHSVASQLAQ QKEYNLKKPS AYHYDILVLG IMVLLCGLLG IPPSNGVLPQ SPMHTKSLAV LKRQLLSKKM VDTAKDSIGR SATTLEIYGK
401: MEEIFIEMDS EQNTGSVDKE LKNFKDAVLQ EGNEEGKLAR EFDPRKHIEA HLPVRVNEQR LSNLLQSILV GGCVGAMPVI RMIPTSVLWG YFAYMAIDSL
501: PGNQFWERIQ LLFVAESRLY KVLEGPHASF VESVVPKTIT IFTIFQLVYL LICFGITWIP IAGILFPVPF FLMILIRQYL LPKFFDPIVL RELDAAEYEE
601: LDGIALEHNL EDEVSEVASC PSRPDAEILD ELTTNRGEVK HRTSSLREER PIQVATNAVQ PSL
Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)
001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.