Skip to main content
crop-pal logo
Barley
Search for another protein from :
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G326900.1 Wheat plasma membrane 95.25 96.25
TraesCS4B01G330000.1 Wheat plasma membrane 95.1 95.95
TraesCS5A01G501500.1 Wheat plasma membrane 94.06 94.9
HORVU3Hr1G023560.1 Barley plasma membrane 86.92 87.84
HORVU3Hr1G023480.4 Barley plasma membrane 86.92 87.84
Os01t0175700-01 Rice plasma membrane 82.91 83.04
Os01t0175600-01 Rice plasma membrane 82.02 82.14
OQU86222 Sorghum plasma membrane 79.94 81.15
HORVU0Hr1G032340.2 Barley plasma membrane 60.92 80.87
Zm00001d039647_P001 Maize plasma membrane 80.09 80.45
GSMUA_Achr2P19680_001 Banana plasma membrane 69.09 69.92
KRH09786 Soybean plasma membrane 67.76 68.16
PGSC0003DMT400014548 Potato plasma membrane 67.16 67.16
PGSC0003DMT400074816 Potato plasma membrane 65.23 66.92
KRH23534 Soybean plasma membrane 61.37 66.83
GSMUA_Achr5P06140_001 Banana plasma membrane 65.97 66.57
VIT_04s0008g04980.t01 Wine grape plasma membrane 65.38 65.77
VIT_11s0016g04740.t01 Wine grape plasma membrane 65.53 65.33
CDY39649 Canola plasma membrane 65.23 65.04
Solyc03g120020.2.1 Tomato plasma membrane 67.01 64.61
KRH52492 Soybean plasma membrane 62.41 64.12
PGSC0003DMT400073484 Potato mitochondrion, plasma membrane 49.48 64.04
VIT_09s0002g05810.t01 Wine grape plasma membrane 65.23 63.9
KRH61813 Soybean plasma membrane 62.85 63.9
AT1G15460.1 Thale cress cytosol, golgi, peroxisome 64.78 63.84
CDY37274 Canola plasma membrane 64.04 63.1
Bra008167.1-P Field mustard plasma membrane 63.74 62.81
CDY68117 Canola plasma membrane 63.74 62.81
Bra037053.1-P Field mustard plasma membrane 61.37 62.67
CDY13492 Canola plasma membrane 61.37 62.58
CDX72362 Canola plasma membrane 61.37 62.48
Bra009840.1-P Field mustard plasma membrane 61.37 62.39
AT1G74810.4 Thale cress plasma membrane 63.3 62.37
CDX88179 Canola plasma membrane 62.26 62.35
CDX80510 Canola plasma membrane 61.81 62.0
CDX68852 Canola plasma membrane 61.37 61.64
KRH05103 Soybean plasma membrane 60.62 61.54
AT4G32510.2 Thale cress plasma membrane 61.66 61.48
AT5G25430.1 Thale cress golgi, peroxisome, plasma membrane 60.77 60.95
CDY46028 Canola cytosol, golgi, plasma membrane 47.55 60.04
HORVU1Hr1G025890.7 Barley plastid 68.65 58.93
Solyc08g066960.2.1 Tomato plasma membrane 64.49 53.32
Solyc06g067900.1.1 Tomato golgi 27.49 53.01
HORVU5Hr1G022140.1 Barley cytosol, golgi, plasma membrane 53.19 50.28
CDX75250 Canola plastid 61.37 33.99
Bra026129.1-P Field mustard plasma membrane 65.53 28.11
CDY36563 Canola plasma membrane 65.23 27.94
CDX68853 Canola plastid 0.3 0.38
Protein Annotations
EnsemblPlants:HORVU4Hr1G081330.4EnsemblPlantsGene:HORVU4Hr1G081330GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575
GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0015698GO:GO:0016020GO:GO:0016021
InterPro:HCO3_transpt_CInterPro:HCO3_transpt_eukPANTHER:PTHR11453PANTHER:PTHR11453:SF40PFAM:PF00955SEG:seg
TMHMM:TMhelixUniParc:UPI000B477847UniProt:A0A287PUH3MapMan:24.2.3.6::
Description
No Description!
Coordinates
chrchr4H:-:619001858..619007064
Molecular Weight (calculated)
75356.1 Da
IEP (calculated)
6.723
GRAVY (calculated)
0.227
Length
673 amino acids
Sequence
(BLAST)
001: MDLLRNPFKG VVADVKGRAP WYKDDWLAGL RAGFGILAPT MYIFFASALP VIAFGEQLSN ETNGILSTVE TLASTAICGI IHAILGGQPM MIVGVAEPTI
101: IMYTYLYSFA KKQPGLGERL YLAWAGWVCI WTAIMLFLLA MFNASNVISR FTRVAGELFG MLITVLFLQE AIKGIVGEFS MPKDAEIFDR SSPIYQFQWI
201: YVNGLLGVIF SIGLLYSALK TRRARSWLYG IGWLRSFIAD YGVPLMVIVW TAFSYALPSG VPSGVPRRLF SPLPWESSSL GHWTVAKDLF SVPPAYIFAA
301: IVPALMVAGL YFFDHSVASQ LAQQQEFNLK KPSAYHYDIL VLGFMVLLCG LIGIPPANGV LPQSPMHTRS LAVLKGQLMR KRMLRTAKEG MSNRASSLEI
401: YGKMHEVFIE MDNKQDADSV DKDLKSLKDA VLREGDEDGK LAGEFDPRKH IEAHLPVRVN EQRLSNLLQS LLVGGCVGAM PVIKMIPTSV LWGYFAYMAI
501: DSLPGNQFWE RIQLLFVGAS RRYKVLEGPH ASFVESVSSR TIYVFTIFQI VYFLICFGTT WIPIAGILFP LPFFLMILIR QYLLPKFFEP NDLRELDAAE
601: YDELEGVQHE HTLEEDGSIS GSCDGRIDAE ILDELTTHRG ELKHRVVSHR EERHLQVHSS SSESSRLKEV LPE
Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)
001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.