Factsheet for Bra026129.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36563	Canola	plasma membrane	99.3	99.17
AT1G15460.1	Thale cress	cytosol, golgi, peroxisome	39.32	90.34
Bra008167.1-P	Field mustard	plasma membrane	36.97	84.92
GSMUA_Achr2P19680_001	Banana	plasma membrane	28.81	67.97
HORVU3Hr1G023560.1	Barley	plasma membrane	28.62	67.42
HORVU3Hr1G023480.4	Barley	plasma membrane	28.62	67.42
TraesCS3A01G126300.1	Wheat	golgi	28.36	66.82
Bra037053.1-P	Field mustard	plasma membrane	27.98	66.62
GSMUA_Achr5P06140_001	Banana	plasma membrane	28.04	65.97
TraesCS4D01G326900.1	Wheat	plasma membrane	27.98	65.92
OQU86222	Sorghum	plasma membrane	27.85	65.91
Os05t0176800-01	Rice	plasma membrane	28.43	65.88
Zm00001d039647_P001	Maize	plasma membrane	28.11	65.82
TraesCS3B01G145500.3	Wheat	plasma membrane	28.3	65.78
TraesCS4B01G330000.1	Wheat	plasma membrane	27.92	65.67
HORVU4Hr1G081330.4	Barley	plasma membrane	28.11	65.53
TraesCS5A01G501500.1	Wheat	plasma membrane	27.85	65.52
TraesCS7B01G475400.1	Wheat	plasma membrane	27.47	65.3
Os01t0175600-01	Rice	plasma membrane	27.92	65.18
Os01t0175700-01	Rice	plasma membrane	27.85	65.03
Bra009840.1-P	Field mustard	plasma membrane	27.34	64.8
HORVU0Hr1G032340.2	Barley	plasma membrane	20.4	63.12
KXG21448	Sorghum	plasma membrane	27.15	62.01
TraesCS3D01G127300.4	Wheat	plasma membrane	27.72	61.35
Zm00001d009789_P006	Maize	plasma membrane	26.9	60.46
Zm00001d042982_P001	Maize	plasma membrane	24.35	57.79
Bra014404.1-P	Field mustard	plasma membrane	25.24	56.01
Bra021386.1-P	Field mustard	plasma membrane	24.92	55.78
Bra004476.1-P	Field mustard	plasma membrane	24.98	55.68
Bra000442.1-P	Field mustard	plasma membrane	24.86	55.48
TraesCS1B01G137300.2	Wheat	mitochondrion, plasma membrane	26.58	55.38
TraesCS1D01G118600.2	Wheat	plasma membrane	26.83	54.89
TraesCS1A01G117500.3	Wheat	plasma membrane	26.77	54.62
HORVU1Hr1G025890.7	Barley	plastid	27.21	54.46
Bra001198.1-P	Field mustard	plasma membrane	23.77	50.82
Zm00001d048447_P002	Maize	cytosol	20.97	37.9

Protein Annotations

MapMan:17.1.3.2.1.3.5	Gene3D:2.130.10.10	MapMan:24.2.3.6	EnsemblPlantsGene:Bra026129	EnsemblPlants:Bra026129.1	EnsemblPlants:Bra026129.1-P
InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0015698	GO:GO:0016020
GO:GO:0016021	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M4EBH0	PFAM:PF00400	PFAM:PF00955	PFAM:PF04003	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR11453	PANTHER:PTHR11453:SF48	SMART:SM00320	SUPFAM:SSF50978
SUPFAM:SSF69322	InterPro:SSU_processome_Utp12	TMHMM:TMhelix	UniParc:UPI000253F0A5	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

AT1G15460 (E=0.0) ATBOR4, BOR4 | BOR4 (REQUIRES HIGH BORON 4); anion exchanger

Coordinates

chrA06:-:5931624..5938874

Molecular Weight (calculated)

176235.0 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.110

Length

1569 amino acids

Sequence
(BLAST)

0001: MEKEISSKRP FRGIIADFKG RALCYKQDWI TGLRSGFGIL APTTYIFFAS ALPVIAFGEQ LSRDTDGALS TVETLASTAL CGVIHSILGG QPLLILGVAE
0101: PTVLMYVYLY NFAKGRPELG KELYLAWVAW VCVWTAMLLF LMATLNAADI INRFTRVAGE LFGMLISVLF IQQAIKGMVG EFSMPKEGDS KLEKYKFEWL
0201: YTNGLLGLIF TFGLLYTALK SRKARSWRYG TGWYRSFIAD YGVPLMVVVW TALSFTTPSK LPSGVPRRLF SPLPWDSASL EHWTVIKDMG KVSPEYIFAA
0301: FIPALMIAGL YFFDHSVASQ LAQQKEFNLK NPSAYHYDIL LLGFMTLICG LLGLPPSNGV LPQSPMHTKS LAVLKRQLIR RKMVKTAKES IRKRATSSEV
0401: YENMQEVFIE MDKSPIAQTN RTVILELQDL KEAVMKSNED EGERDEESGF DPEKHLDAYL PVRVNEQRVS NLLQSLLVAG AVLAMPAIKL MPTSVLWGYF
0501: AYMAIDSLPG NQFFERMMLL FVLPSRRFKV LEGAHASFVE KVPYKSMAAF TILQIVYFGI CYGVTWIPVA GIMFPVPFFL LIAIRQYILP KLFNPSHLRE
0601: LDAAEYEEIP GTPRDPLELS FRATDTTKGV PENDAEILDE LTTRRGELKV RTLSLNEDKG NQIYPKEKVQ AEDETRVLRD NFVTDPQAMN YRFQNLLGAP
0701: YRGGNAVVTQ NTQLISPVGN RVSVTDLTKH HTVTLELSTS TNICRLAASP DGTFLMAVDE NSRCLFINVP RRAVLHRMTF KGKVGALKFS PDGRFIAVGV
0801: GKLVEIWESP GFSRAAFAFQ RVRTFASSDD KVVSLEWSLD SEYLLVGTKD LAARLFCVRK LKGVLNKPYL FLGHRDSVVG CFFGVDKMTN KVNRAFTVAR
0901: DGYMFSWGYS GKDAEAEESL SPDTPERDNE SDIDIKKRKE YEGRGREDED EEEEYMHRGK WVLLRKDGFN QGSAKVTACD YHQGLDMVVV GFSNGVFGLY
1001: QMPDFICIHL LSISREKLTT AVFNQRGNWL TFGCARLGQL LVWEWRSESY ILKQQGHYFD VNCVTYSSDS QFLATGADDN KVKVWNVASG SCFITFTEHT
1101: NAVTALHFMA DNHSLLSASL DGTVRAWDFR RYKNYKTYTT PTPRQFVSLT ADPSGDVVCA GTLDSFEIFV WSKKTGQIKD ILNGHEAPVH GLMFSPLTQI
1201: LASSSWDNTV RLWDVFASKG TVETFQHNHD VLTVTFRPDG KQLASCTLDG QIHFWDTVDG VLMYTIEGRR DIAGGRNMTD RRSAANSSSG KCFTTLCYSA
1301: DGSYILAAGN SRYICMYDIS DQVLLRRFQI SHNLSYDGVL DFLNSKKMTE AGPMDLIEDD NSDEEDGIDK QSRGNLGYDL PGSKPNRGRP IIRTKSLSIA
1401: PTGRSFAAAT TEGVLIFSVD ESFIFDPTDL DIDVTPEAVE DALKQDEVVR ALALSMRLNE DSFIKKCIFA VAPADIKEVA ISVPQKYLER LMEALVDLLE
1501: NCPHLEFLLH WCQEICKAHG SSIQRNYRNL LPSLKSLQKA ITRAHQDLAD MCSSNEYTLR YLCSVPNNH

Best Arabidopsis Sequence Match ( AT1G15440.1 )
(BLAST)

001: MEFRFENLLG APYRGGNAVI TKNTQLISPV GNRVSVTDLS KNHSVTLPLE TSTNICRLAS SPDGTFLLAV DEQNRCLFIN LPRRVVLHRI TFKDKVGALK
101: FSPNGKFIAV GIGKLVEIWR SPGFRRAVLP FERVRTFANS DDKVVSLEWS LDSDYLLVGS RDLAARLFCV RKLKGVLNKP FLFLGHRDSV VGCFFGVDKM
201: TNKVNRAFTI ARDGYIFSWG YTEKDVKMDE SEDGHSEPPS PVTPDRADEV MVENGGGVGT ELKKRKEYDG KGLESDEEGD DDDEEYMHRG KWVLLRKDGC
301: NQASAKVTAC DYHQGLDMVV VGFSNGVFGL YQMPDFICIH LLSISRQKLT TAVFNERGNW LTFGCAKLGQ LLVWDWRTET YILKQQGHYF DVNCVTYSPD
401: SQLLATGADD NKVKVWNVMS GTCFITFTEH TNAVTALHFM ADNHSLLSAS LDGTVRAWDF KRYKNYKTYT TPTPRQFVSL TADPSGDVVC AGTLDSFEIF
501: VWSKKTGQIK DILSGHEAPV HGLMFSPLTQ LLASSSWDYT VRLWDVFASK GTVETFRHNH DVLTVAFRPD GKQLASSTLD GQINFWDTIE GVLMYTIEGR
601: RDIAGGRVMT DRRSAANSSS GKCFTTLCYS ADGGYILAAG TSRYICMYDI ADQVLLRRFQ ISHNLSLDGV LDFLHSKKMT EAGPIDLIDD DNSDEEGGID
701: KQSRGNLGYD LPGSRPNRGR PIIRTKSLSI APTGRSFAAA TTEGVLIFSI DDTFIFDPTD LDIDVTPEAV EAAIEEDEVS RALALSMRLN EDSLIKKCIF
801: AVAPADIKAV AISVRQKYLE RLMEALVDLL ENCPHLEFIL HWCQEICKAH GSSIQRNYRT LLPALRSLQK AITRAHQDLA DMCSSNEYTL RYLCSVPNNH

Arabidopsis Description

PWP2Periodic tryptophan protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.